G1093810


Basic Information

Item Value
gene id G1093810
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 59118722 ~ 59118929 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1243987
ctatggatttcacaagactaggaatacagatatgcatctgttaaaaaaaggtagggtcatggatcaggaaaccagtcagtatctggtatgaccaccatttgcctcatgcacatctccttcgcatagagttgatcagactgttgattgtggcctatggaatgttgtcccactactCTTCAATGAcagtgcaaagttgctggatatttac

Function

NR:

description
PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1243987 True 208 lncRNA 0.42 1 59118722 59118929

Neighbor

gene id symbol gene type direction distance location
LOC110537871 LOC106604470 coding upstream 12716 59052329 ~ 59106006 (+)
LOC110537870 LOC100380866 coding upstream 143586 58961767 ~ 58975136 (+)
LOC110537868 LOC106600641 coding upstream 159488 58935530 ~ 58959234 (+)
LOC110537867 LOC106600640 coding upstream 201313 58875401 ~ 58917409 (+)
LOC110538920 NA coding upstream 245271 58850736 ~ 58873451 (+)
sez6l2 sez6l2 coding downstream 114425 59233354 ~ 59343106 (+)
kctd13 LOC106600645 coding downstream 231850 59350779 ~ 59389927 (+)
hirip3 hirip3 coding downstream 279806 59398735 ~ 59422218 (+)
antkmt fam173a coding downstream 303907 59422836 ~ 59436071 (+)
xpo6 LOC106600647 coding downstream 321302 59440231 ~ 59502350 (+)
G1093719 NA non-coding upstream 131518 58986447 ~ 58987204 (+)
G1093715 NA non-coding upstream 135808 58982635 ~ 58982914 (+)
G1093714 NA non-coding upstream 136250 58982273 ~ 58982472 (+)
G1093713 NA non-coding upstream 137202 58981256 ~ 58981520 (+)
G1093680 NA non-coding upstream 225559 58892952 ~ 58893163 (+)
G1093820 NA non-coding downstream 13257 59132186 ~ 59132476 (+)
G1093823 NA non-coding downstream 24349 59143278 ~ 59143511 (+)
G1093874 NA non-coding downstream 92861 59211790 ~ 59212987 (+)
G1093974 NA non-coding downstream 384487 59503416 ~ 59503617 (+)
G1093979 NA non-coding downstream 397112 59516041 ~ 59516951 (+)
LOC118937686 NA other upstream 896532 58216142 ~ 58222215 (+)
LOC110537841 mtmr4 other upstream 1203890 57893341 ~ 58071571 (+)
LOC110537831 dhx33 other upstream 2000795 57112902 ~ 57118165 (+)
G1091235 NA other upstream 2365775 56752418 ~ 56752947 (+)
G1091217 NA other upstream 2392719 56725607 ~ 56726003 (+)
G1093909 NA other downstream 422629 59541558 ~ 59542603 (+)
G1094218 LOC100380853 other downstream 912074 60031003 ~ 60034020 (+)
G1095244 LOC108238713 other downstream 1266735 60385664 ~ 60385973 (+)
LOC110539079 LOC106600700 other downstream 1577758 60696612 ~ 60777061 (+)
G1095209 NA other downstream 1697562 60816491 ~ 60818897 (+)

Expression


Co-expression Network