G1093974



Basic Information


Item Value
gene id G1093974
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 59503416 ~ 59503617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1244158
CGTAAATGTGCAATGATTTGGTTGCAAGGTTTTTATACTGCTGTGAAAGTTCAATGTTGTGTGACAATATTTCATTGACTTGGCTATATGTGGAAATAGTGCAGTGATTGGCAAGATCAACGCAGGTCGCCCGCTGAGCAGCGCCTGATGCTTCCTGGTCACTGTGTTGTGTATATTATTTATTAACTATCGATGATTATAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1244158 True 202 lncRNA 0.40 1 59503416 59503617

Neighbor


gene id symbol gene type direction distance location
xpo6 LOC106600647 coding upstream 1066 59440231 ~ 59502350 (+)
antkmt fam173a coding upstream 67345 59422836 ~ 59436071 (+)
hirip3 hirip3 coding upstream 81198 59398735 ~ 59422218 (+)
kctd13 LOC106600645 coding upstream 113489 59350779 ~ 59389927 (+)
sez6l2 sez6l2 coding upstream 160310 59233354 ~ 59343106 (+)
nme4 LOC100301668 coding downstream 4951 59508568 ~ 59539373 (+)
ccdc137 ccdc137 coding downstream 42502 59546119 ~ 59558479 (+)
LOC118937690 NA coding downstream 92997 59596614 ~ 59598278 (+)
LOC110537890 NA coding downstream 95754 59599371 ~ 59611523 (+)
LOC110537886 LOC106600678 coding downstream 168600 59672217 ~ 59673882 (+)
G1093874 NA non-coding upstream 290429 59211790 ~ 59212987 (+)
G1093823 NA non-coding upstream 359905 59143278 ~ 59143511 (+)
G1093820 NA non-coding upstream 370940 59132186 ~ 59132476 (+)
G1093810 NA non-coding upstream 384487 59118722 ~ 59118929 (+)
G1093719 NA non-coding upstream 516212 58986447 ~ 58987204 (+)
G1093979 NA non-coding downstream 12424 59516041 ~ 59516951 (+)
G1094003 NA non-coding downstream 73763 59577380 ~ 59577673 (+)
G1094009 NA non-coding downstream 82849 59586466 ~ 59587553 (+)
G1094010 amdhd2 non-coding downstream 88094 59591711 ~ 59593406 (+)
G1094084 NA non-coding downstream 182145 59685762 ~ 59686067 (+)
LOC118937686 NA other upstream 1281226 58216142 ~ 58222215 (+)
LOC110537841 mtmr4 other upstream 1588584 57893341 ~ 58071571 (+)
LOC110537831 dhx33 other upstream 2385489 57112902 ~ 57118165 (+)
G1091235 NA other upstream 2750469 56752418 ~ 56752947 (+)
G1091217 NA other upstream 2777413 56725607 ~ 56726003 (+)
G1093909 NA other downstream 37941 59541558 ~ 59542603 (+)
G1094218 LOC100380853 other downstream 527386 60031003 ~ 60034020 (+)
G1095244 LOC108238713 other downstream 882047 60385664 ~ 60385973 (+)
LOC110539079 LOC106600700 other downstream 1193070 60696612 ~ 60777061 (+)
G1095209 NA other downstream 1312874 60816491 ~ 60818897 (+)

Expression



Co-expression Network