G1094003



Basic Information


Item Value
gene id G1094003
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 59577380 ~ 59577673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1244187
GTGACTGTTATGAGCAACACAAATGCTAATATTTGTGCCTCTCAAATGTCTTTAAGGTAGGATACATGTATTTGTACAGAAAGGATGTACACATATCCTGTCTAAGATCACTGTTGTATCCAACCTGAATGTTCAACACCCTCCTGTGGATAGAATATTTTTTTAACCACTGTGATGTTTTTATGCTTAGCACTCCTGTAATGCCAAACTTGATTTTTCCTAAACCAACACATGTGTTTGTCTCTTGGAATCACTACCATGATCACagattattataatgatgatgacgTGAAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1244187 True 294 lncRNA 0.36 1 59577380 59577673

Neighbor


gene id symbol gene type direction distance location
ccdc137 ccdc137 coding upstream 18901 59546119 ~ 59558479 (+)
nme4 LOC100301668 coding upstream 38007 59508568 ~ 59539373 (+)
xpo6 LOC106600647 coding upstream 75030 59440231 ~ 59502350 (+)
antkmt fam173a coding upstream 141309 59422836 ~ 59436071 (+)
hirip3 hirip3 coding upstream 155162 59398735 ~ 59422218 (+)
LOC118937690 NA coding downstream 18941 59596614 ~ 59598278 (+)
LOC110537890 NA coding downstream 21698 59599371 ~ 59611523 (+)
LOC110537886 LOC106600678 coding downstream 94544 59672217 ~ 59673882 (+)
atp6v0ca vatl coding downstream 110996 59688669 ~ 59702156 (+)
LOC110537889 LOC106561172 coding downstream 128272 59705945 ~ 59708325 (+)
G1093979 NA non-coding upstream 60429 59516041 ~ 59516951 (+)
G1093974 NA non-coding upstream 73763 59503416 ~ 59503617 (+)
G1093874 NA non-coding upstream 364393 59211790 ~ 59212987 (+)
G1093823 NA non-coding upstream 433869 59143278 ~ 59143511 (+)
G1093820 NA non-coding upstream 444904 59132186 ~ 59132476 (+)
G1094009 NA non-coding downstream 8793 59586466 ~ 59587553 (+)
G1094010 amdhd2 non-coding downstream 14038 59591711 ~ 59593406 (+)
G1094084 NA non-coding downstream 108089 59685762 ~ 59686067 (+)
LOC110537883 LOC106600674 non-coding downstream 147241 59710093 ~ 59726547 (+)
G1093909 NA other upstream 34777 59541558 ~ 59542603 (+)
LOC118937686 NA other upstream 1355190 58216142 ~ 58222215 (+)
LOC110537841 mtmr4 other upstream 1662548 57893341 ~ 58071571 (+)
LOC110537831 dhx33 other upstream 2459453 57112902 ~ 57118165 (+)
G1091235 NA other upstream 2824433 56752418 ~ 56752947 (+)
G1094218 LOC100380853 other downstream 453330 60031003 ~ 60034020 (+)
G1095244 LOC108238713 other downstream 807991 60385664 ~ 60385973 (+)
LOC110539079 LOC106600700 other downstream 1119014 60696612 ~ 60777061 (+)
G1095209 NA other downstream 1238818 60816491 ~ 60818897 (+)
mmp25a LOC106600705 other downstream 1377027 60931123 ~ 60965921 (+)

Expression



Co-expression Network