Gene
RNA
| Item | Value |
|---|---|
| gene id | G1094009 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 59586466 ~ 59587553 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1244193 | True | 1000 | lncRNA | 0.40 | 2 | 59586466 | 59587553 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccdc137 | ccdc137 | coding | upstream | 27987 | 59546119 ~ 59558479 (+) |
| nme4 | LOC100301668 | coding | upstream | 47093 | 59508568 ~ 59539373 (+) |
| xpo6 | LOC106600647 | coding | upstream | 84116 | 59440231 ~ 59502350 (+) |
| antkmt | fam173a | coding | upstream | 150395 | 59422836 ~ 59436071 (+) |
| hirip3 | hirip3 | coding | upstream | 164248 | 59398735 ~ 59422218 (+) |
| LOC118937690 | NA | coding | downstream | 9061 | 59596614 ~ 59598278 (+) |
| LOC110537890 | NA | coding | downstream | 11818 | 59599371 ~ 59611523 (+) |
| LOC110537886 | LOC106600678 | coding | downstream | 84664 | 59672217 ~ 59673882 (+) |
| atp6v0ca | vatl | coding | downstream | 101116 | 59688669 ~ 59702156 (+) |
| LOC110537889 | LOC106561172 | coding | downstream | 118392 | 59705945 ~ 59708325 (+) |
| G1094003 | NA | non-coding | upstream | 8793 | 59577380 ~ 59577673 (+) |
| G1093979 | NA | non-coding | upstream | 69515 | 59516041 ~ 59516951 (+) |
| G1093974 | NA | non-coding | upstream | 82849 | 59503416 ~ 59503617 (+) |
| G1093874 | NA | non-coding | upstream | 373479 | 59211790 ~ 59212987 (+) |
| G1093823 | NA | non-coding | upstream | 442955 | 59143278 ~ 59143511 (+) |
| G1094010 | amdhd2 | non-coding | downstream | 4158 | 59591711 ~ 59593406 (+) |
| G1094084 | NA | non-coding | downstream | 98209 | 59685762 ~ 59686067 (+) |
| LOC110537883 | LOC106600674 | non-coding | downstream | 137361 | 59710093 ~ 59726547 (+) |
| G1094095 | NA | non-coding | downstream | 147389 | 59734942 ~ 59735397 (+) |
| G1093909 | NA | other | upstream | 43863 | 59541558 ~ 59542603 (+) |
| LOC118937686 | NA | other | upstream | 1364276 | 58216142 ~ 58222215 (+) |
| LOC110537841 | mtmr4 | other | upstream | 1671634 | 57893341 ~ 58071571 (+) |
| LOC110537831 | dhx33 | other | upstream | 2468539 | 57112902 ~ 57118165 (+) |
| G1091235 | NA | other | upstream | 2833519 | 56752418 ~ 56752947 (+) |
| G1094218 | LOC100380853 | other | downstream | 443450 | 60031003 ~ 60034020 (+) |
| G1095244 | LOC108238713 | other | downstream | 798111 | 60385664 ~ 60385973 (+) |
| LOC110539079 | LOC106600700 | other | downstream | 1109134 | 60696612 ~ 60777061 (+) |
| G1095209 | NA | other | downstream | 1228938 | 60816491 ~ 60818897 (+) |
| mmp25a | LOC106600705 | other | downstream | 1367147 | 60931123 ~ 60965921 (+) |
