G1094783


Basic Information

Item Value
gene id G1094783
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 59700468 ~ 59702147 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1245059
GATTTAATTGGATATTAGACAGACGAGGCCCGCCAGTGAGCAACTGCAACCACATGGCTGGGGTTTACTCATTACATCTTGCAATGGAAACAATTTACGAATCAAACGGGGGACCTACCTGAATCTGTCCAATAGAATCTGTCTAGTTTTCATTTGGAATATTGATTACACCCCAGTACTACAGGTCAACAGTACAAATGAGAATGATGTCTTAGAGTTAACAGACACACACTTTTACATGCCAGCCACCATAAAGAGTTAACTCCCACTCCAACATCTGCACATCAGAGACAGTCTCCACTGGACACATGCATCCAGAGGAATTCAAAGCCCTTAGAACAATTACCCACAGTGCAATTAATCTAGCTATACAGATATTTattagatagagatatatatacacacgcacacacctctcCATCTCATTGGGAACTCGATAAAACAGTTTTATTAACATTTCAAAATCTTCATAAATAATTAGTGAAAAAAACAACCAAACCAAAAAAAAGAGTTATCCATGTCCTCGTATTAGTTAGGTCCTTTAATGTGAAAATGGTCCCCAGAAAAATAAAATTATTTGTCCAACAGTCCGTTCTTCGGACatttaaagaaaaaaacaaacaaaaggaacaataataataaaagccatttagcagacacataAATGAGAGGAAATTGGGAGGAAGGAGGTAAACCAATACTCAAGCACACACAGGACGAAAGCGTCACTACATTTACAAAGCGCATTTATAAGGGTTTGGCTAGTTGACGACTGTACAGGAAAAGACTGGAATAGGAGACGCTTTTCACTTCACGCCCAATCTCAAATCACGCCGTGTCCCAAATCTTGAGTTTGACCAGAGCACAATATAACTCTGGTCaatagtgcactatttagagaagaatatggtgccatttgggacacagcccttaACACCTCAAGATGCCTCCCTCGTAGATCTGACAGGCATGAATGTAGGAGTGGCTttaccattttatttttttatatatttttttaacctttatttaaccaggcaaACCAAGAGATGGCTAACACTCATTCAAACCTATTAGATCTACAAAGGACTCGGTAGTGTCACTAGGAAAGAAGTGGCTAAAGGGAGTCGATTTGGAACCAGGCGTAAAGGCATGCTCTCCAATTTGTTCTTTATTTCTTAGACGTTTATATATGGAATGGATGACGTAGCGTTGACTCGACGTACACAGACGGACAGATGGACTTTGCTCTCTCTATTTTGTGGAGAGGATGAGAGCCACAATAAGACCGTAGAGCCCCAGGACCTCTGCAAAGATCAGGATGAGGATCATGCCCACGAAGAGCCTGGGCTGCTGGGCCGTGCCCCGAACACCTGCATCGCCCACAATGCCGATGGCGAAACCAGCCGCCAGCCCACTCAGCCCCACACTCAGCCCAGCACCCAGGTGGAGGAAACTCCTacaggagagaggtgagggatagagaaagatggagagagggtagaaAAAG

Function

NR:

description
V-type proton ATPase proteolipid subunit, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1245059 True 1507 TUCP 0.42 2 59700468 59702147

Neighbor

gene id symbol gene type direction distance location
amdhd2 amdhd2 coding downstream 104281 59586461 ~ 59596187 (-)
LOC118936462 LOC106600673 coding downstream 125905 59571144 ~ 59574563 (-)
LOC110537880 LOC106600673 coding downstream 131157 59567856 ~ 59569311 (-)
asphd1 asphd1 coding downstream 419891 59214586 ~ 59280577 (-)
pitpnbl LOC107739385 coding downstream 512719 59144152 ~ 59187749 (-)
LOC118937689 LOC106567469 coding upstream 6078 59708225 ~ 59710379 (-)
mapk8ip3 mapk8ip3 coding upstream 67585 59769732 ~ 59838516 (-)
jpt2 hn1l coding upstream 156068 59858215 ~ 59881634 (-)
dhrs7b dhrs7b coding upstream 252876 59955023 ~ 59963331 (-)
tmem11 LOC106600685 coding upstream 262876 59965023 ~ 59967584 (-)
G1094798 NA non-coding downstream 13037 59687205 ~ 59687431 (-)
G1094797 NA non-coding downstream 13331 59686899 ~ 59687137 (-)
G1094726 NA non-coding downstream 109360 59579325 ~ 59591108 (-)
G1094717 NA non-coding downstream 134137 59565359 ~ 59566331 (-)
G1094716 NA non-coding downstream 135444 59564378 ~ 59565024 (-)
G1094800 NA non-coding upstream 469 59702616 ~ 59702893 (-)
G1094802 NA non-coding upstream 2665 59704812 ~ 59705861 (-)
G1094804 NA non-coding upstream 22801 59724948 ~ 59726544 (-)
G1094819 NA non-coding upstream 36075 59738222 ~ 59738638 (-)
G1094699 NA other downstream 161088 59508598 ~ 59539380 (-)
G1092523 NA other downstream 2343194 57291444 ~ 57357274 (-)
G1092205 LOC106567410 other downstream 2841321 56857338 ~ 56859147 (-)
LOC110537819 LOC106567417 other downstream 3407851 56283753 ~ 56378107 (-)
natd1 natd1 other upstream 266121 59968254 ~ 59971543 (-)
snrnp70 LOC106583923 other upstream 636727 60336697 ~ 60349405 (-)
G1097645 NA other upstream 1336569 61038716 ~ 61324712 (-)
LOC110539101 NA other upstream 1441965 61144112 ~ 61244327 (-)
G1097817 NA other upstream 1801813 61503960 ~ 61504834 (-)

Expression

G1094783 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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G1094783 Expression in each Bioproject

Bar chart with 17 bars.
G1094783 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location