Gene
RNA
| Item | Value |
|---|---|
| gene id | G1094201 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 59979767 ~ 59980079 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: retrovirus-related Pol polyprotein from transposon 17.6 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1244408 | True | 313 | lncRNA | 0.58 | 1 | 59979767 | 59980079 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cramp1 | cramp1 | coding | upstream | 43290 | 59883053 ~ 59936477 (+) |
| nme3 | nme3 | coding | upstream | 219240 | 59755264 ~ 59760527 (+) |
| mrps34 | mrps34 | coding | upstream | 228533 | 59741166 ~ 59751234 (+) |
| LOC110537883 | LOC106600674 | coding | upstream | 254511 | 59710093 ~ 59726547 (+) |
| LOC110537889 | LOC106561172 | coding | upstream | 271442 | 59705945 ~ 59708325 (+) |
| parp14rs1 | LOC106600688 | coding | downstream | 667 | 59980746 ~ 60009869 (+) |
| lin7b | lin7b | coding | downstream | 337153 | 60317232 ~ 60322740 (+) |
| ap2a1 | LOC106600693 | coding | downstream | 434964 | 60415043 ~ 60463695 (+) |
| si:ch211-195b15.8 | LOC106600694 | coding | downstream | 498366 | 60478445 ~ 60482021 (+) |
| LOC110537905 | LOC106583918 | coding | downstream | 502811 | 60482890 ~ 60500493 (+) |
| G1094196 | NA | non-coding | upstream | 4082 | 59975427 ~ 59975685 (+) |
| G1094195 | NA | non-coding | upstream | 5009 | 59974505 ~ 59974758 (+) |
| G1094178 | NA | non-coding | upstream | 33696 | 59945829 ~ 59946071 (+) |
| G1094148 | NA | non-coding | upstream | 36438 | 59941127 ~ 59943329 (+) |
| G1094119 | NA | non-coding | upstream | 188527 | 59790942 ~ 59791240 (+) |
| G1094219 | NA | non-coding | downstream | 51936 | 60032015 ~ 60092081 (+) |
| G1095032 | NA | non-coding | downstream | 143330 | 60123409 ~ 60123653 (+) |
| G1095057 | NA | non-coding | downstream | 160375 | 60140454 ~ 60140666 (+) |
| G1095072 | LOC100136012 | non-coding | downstream | 170822 | 60150901 ~ 60151199 (+) |
| G1095073 | NA | non-coding | downstream | 171295 | 60151374 ~ 60151730 (+) |
| G1093909 | NA | other | upstream | 437164 | 59541558 ~ 59542603 (+) |
| LOC118937686 | NA | other | upstream | 1757577 | 58216142 ~ 58222215 (+) |
| LOC110537841 | mtmr4 | other | upstream | 2064935 | 57893341 ~ 58071571 (+) |
| LOC110537831 | dhx33 | other | upstream | 2861840 | 57112902 ~ 57118165 (+) |
| G1091235 | NA | other | upstream | 3226820 | 56752418 ~ 56752947 (+) |
| G1094218 | LOC100380853 | other | downstream | 50924 | 60031003 ~ 60034020 (+) |
| G1095244 | LOC108238713 | other | downstream | 405585 | 60385664 ~ 60385973 (+) |
| LOC110539079 | LOC106600700 | other | downstream | 716608 | 60696612 ~ 60777061 (+) |
| G1095209 | NA | other | downstream | 836412 | 60816491 ~ 60818897 (+) |
| mmp25a | LOC106600705 | other | downstream | 974621 | 60931123 ~ 60965921 (+) |
