Gene
RNA
| Item | Value |
|---|---|
| gene id | G1095072 |
| gene name | LOC100136012 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 60150901 ~ 60151199 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1245402 | True | 299 | lncRNA | 0.49 | 1 | 60150901 | 60151199 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| parp14rs1 | LOC106600688 | coding | upstream | 141032 | 59980746 ~ 60009869 (+) |
| cramp1 | cramp1 | coding | upstream | 214424 | 59883053 ~ 59936477 (+) |
| nme3 | nme3 | coding | upstream | 390374 | 59755264 ~ 59760527 (+) |
| mrps34 | mrps34 | coding | upstream | 399667 | 59741166 ~ 59751234 (+) |
| LOC110537883 | LOC106600674 | coding | upstream | 425645 | 59710093 ~ 59726547 (+) |
| lin7b | lin7b | coding | downstream | 166033 | 60317232 ~ 60322740 (+) |
| ap2a1 | LOC106600693 | coding | downstream | 263844 | 60415043 ~ 60463695 (+) |
| si:ch211-195b15.8 | LOC106600694 | coding | downstream | 327246 | 60478445 ~ 60482021 (+) |
| LOC110537905 | LOC106583918 | coding | downstream | 331691 | 60482890 ~ 60500493 (+) |
| prrg2 | prrg2 | coding | downstream | 350503 | 60501702 ~ 60511300 (+) |
| G1095057 | NA | non-coding | upstream | 10235 | 60140454 ~ 60140666 (+) |
| G1095032 | NA | non-coding | upstream | 27248 | 60123409 ~ 60123653 (+) |
| G1094219 | NA | non-coding | upstream | 58820 | 60032015 ~ 60092081 (+) |
| G1094201 | NA | non-coding | upstream | 170822 | 59979767 ~ 59980079 (+) |
| G1094196 | NA | non-coding | upstream | 175216 | 59975427 ~ 59975685 (+) |
| G1095073 | NA | non-coding | downstream | 175 | 60151374 ~ 60151730 (+) |
| G1095077 | NA | non-coding | downstream | 2657 | 60153856 ~ 60154067 (+) |
| G1095229 | NA | non-coding | downstream | 214512 | 60365711 ~ 60366004 (+) |
| G1095232 | NA | non-coding | downstream | 218237 | 60369436 ~ 60369658 (+) |
| G1095235 | NA | non-coding | downstream | 220744 | 60371943 ~ 60372436 (+) |
| G1094218 | LOC100380853 | other | upstream | 116881 | 60031003 ~ 60034020 (+) |
| G1093909 | NA | other | upstream | 608298 | 59541558 ~ 59542603 (+) |
| LOC118937686 | NA | other | upstream | 1928711 | 58216142 ~ 58222215 (+) |
| LOC110537841 | mtmr4 | other | upstream | 2236069 | 57893341 ~ 58071571 (+) |
| LOC110537831 | dhx33 | other | upstream | 3032974 | 57112902 ~ 57118165 (+) |
| G1095244 | LOC108238713 | other | downstream | 234465 | 60385664 ~ 60385973 (+) |
| LOC110539079 | LOC106600700 | other | downstream | 545488 | 60696612 ~ 60777061 (+) |
| G1095209 | NA | other | downstream | 665292 | 60816491 ~ 60818897 (+) |
| mmp25a | LOC106600705 | other | downstream | 803501 | 60931123 ~ 60965921 (+) |
| G1095540 | NA | other | downstream | 886540 | 61037739 ~ 61352345 (+) |
