Gene
RNA
| Item | Value |
|---|---|
| gene id | G1095653 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 61380225 ~ 61380439 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1246064 | True | 215 | lncRNA | 0.30 | 1 | 61380225 | 61380439 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110539102 | NA | coding | upstream | 55070 | 61317055 ~ 61325155 (+) |
| LOC110538925 | cln3 | coding | upstream | 95032 | 61258812 ~ 61285193 (+) |
| LOC118936506 | NA | coding | upstream | 169744 | 61200915 ~ 61210481 (+) |
| LOC118936507 | cln3 | coding | upstream | 198449 | 61178894 ~ 61181776 (+) |
| LOC118937695 | NA | coding | upstream | 216127 | 61163833 ~ 61164098 (+) |
| LOC110539107 | LOC106600721 | coding | downstream | 144259 | 61524698 ~ 61530938 (+) |
| LOC110539080 | LOC106600701 | coding | downstream | 207124 | 61587563 ~ 61596487 (+) |
| nudt9 | nudt9 | coding | downstream | 294288 | 61674727 ~ 61682763 (+) |
| LOC110537909 | ehd3 | coding | downstream | 302528 | 61682967 ~ 61699122 (+) |
| atp2a1 | atp2a1 | coding | downstream | 344329 | 61724768 ~ 61753320 (+) |
| G1095615 | aldoa | non-coding | upstream | 16287 | 61359536 ~ 61363938 (+) |
| G1095617 | NA | non-coding | upstream | 21376 | 61358017 ~ 61358849 (+) |
| G1095574 | NA | non-coding | upstream | 190089 | 61189756 ~ 61190136 (+) |
| LOC118937693 | NA | non-coding | upstream | 282628 | 61095791 ~ 61097619 (+) |
| G1095657 | NA | non-coding | downstream | 9622 | 61390061 ~ 61390342 (+) |
| G1095665 | NA | non-coding | downstream | 23182 | 61403621 ~ 61444941 (+) |
| G1095666 | LOC106600702 | non-coding | downstream | 24544 | 61404983 ~ 61446364 (+) |
| G1095720 | NA | non-coding | downstream | 91448 | 61471887 ~ 61472297 (+) |
| G1095721 | NA | non-coding | downstream | 92114 | 61472553 ~ 61472783 (+) |
| G1095540 | NA | other | upstream | 27880 | 61037739 ~ 61352345 (+) |
| mmp25a | LOC106600705 | other | upstream | 414630 | 60931123 ~ 60965921 (+) |
| G1095209 | NA | other | upstream | 561328 | 60816491 ~ 60818897 (+) |
| LOC110539079 | LOC106600700 | other | upstream | 666213 | 60696612 ~ 60777061 (+) |
| G1095244 | LOC108238713 | other | upstream | 994252 | 60385664 ~ 60385973 (+) |
| LOC118937701 | LOC100136295 | other | downstream | 1066065 | 62441706 ~ 62448515 (+) |
| LOC100305204 | hebp2 | other | downstream | 1922052 | 63302491 ~ 63334694 (+) |
| LOC110538933 | LOC106600901 | other | downstream | 2507657 | 63888086 ~ 63908673 (+) |
| G1097063 | NA | other | downstream | 2755919 | 64136358 ~ 64136704 (+) |
| G1097116 | NA | other | downstream | 2847562 | 64228001 ~ 64228684 (+) |
