Gene
RNA
| Item | Value |
|---|---|
| gene id | G1097844 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 61580111 ~ 61580339 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: neurotrophin receptor-interacting factor 1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1248584 | True | 229 | lncRNA | 0.42 | 1 | 61580111 | 61580339 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| srrm2 | LOC106600666 | coding | downstream | 7249 | 61559472 ~ 61572862 (-) |
| thoc6 | LOC106600718 | coding | downstream | 24441 | 61550108 ~ 61555670 (-) |
| si:dkey-16l2.16 | LOC106600727 | coding | downstream | 30311 | 61544105 ~ 61549800 (-) |
| rnf25 | LOC106600708 | coding | downstream | 42604 | 61530957 ~ 61537507 (-) |
| kat8 | LOC106600709 | coding | downstream | 59003 | 61509302 ~ 61521108 (-) |
| ypel3 | LOC103040367 | coding | upstream | 24105 | 61602944 ~ 61613176 (-) |
| LOC110539097 | LOC106600720 | coding | upstream | 37196 | 61617535 ~ 61638811 (-) |
| LOC110539092 | LOC106600714 | coding | upstream | 59291 | 61639630 ~ 61656609 (-) |
| rabep2 | rabep2 | coding | upstream | 173696 | 61754035 ~ 61764691 (-) |
| LOC110538926 | LOC106600736 | coding | upstream | 186190 | 61766529 ~ 61767185 (-) |
| G1097837 | NA | non-coding | downstream | 21615 | 61558187 ~ 61558496 (-) |
| G1097836 | NA | non-coding | downstream | 22019 | 61557860 ~ 61558092 (-) |
| G1097835 | NA | non-coding | downstream | 22284 | 61557466 ~ 61557827 (-) |
| G1097834 | NA | non-coding | downstream | 23103 | 61556801 ~ 61557008 (-) |
| G1097829 | NA | non-coding | downstream | 50090 | 61529626 ~ 61530021 (-) |
| G1097845 | NA | non-coding | upstream | 226 | 61580565 ~ 61580778 (-) |
| G1097896 | NA | non-coding | upstream | 112420 | 61692759 ~ 61693178 (-) |
| G1097913 | NA | non-coding | upstream | 132016 | 61712355 ~ 61712574 (-) |
| G1097938 | NA | non-coding | upstream | 168143 | 61748482 ~ 61753325 (-) |
| G1097941 | NA | non-coding | upstream | 172995 | 61753334 ~ 61753628 (-) |
| G1097817 | NA | other | downstream | 75277 | 61503960 ~ 61504834 (-) |
| G1097645 | NA | other | downstream | 255399 | 61038716 ~ 61324712 (-) |
| LOC110539101 | NA | other | downstream | 335784 | 61144112 ~ 61244327 (-) |
| snrnp70 | LOC106583923 | other | downstream | 1230758 | 60336697 ~ 60349405 (-) |
| natd1 | natd1 | other | downstream | 1608604 | 59968254 ~ 59971543 (-) |
| G1097852 | LOC106600701 | other | upstream | 10899 | 61591238 ~ 61593463 (-) |
| G1097953 | sh2b1 | other | upstream | 223371 | 61803710 ~ 61808501 (-) |
| G1098154 | LOC106600756 | other | upstream | 602411 | 62182750 ~ 62185946 (-) |
| G1098256 | LOC106600954 | other | upstream | 908828 | 62380280 ~ 62490254 (-) |
