Gene
RNA
| Item | Value |
|---|---|
| gene id | G1095900 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 61892656 ~ 61892998 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1246348 | True | 343 | lncRNA | 0.37 | 1 | 61892656 | 61892998 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537918 | NA | coding | upstream | 56323 | 61835185 ~ 61836333 (+) |
| atxn2l | atxn2l | coding | upstream | 59055 | 61813631 ~ 61833601 (+) |
| sh2b1 | sh2b1 | coding | upstream | 79200 | 61794146 ~ 61813456 (+) |
| LOC110537916 | LOC106600735 | coding | upstream | 119924 | 61768417 ~ 61772732 (+) |
| atp2a1 | atp2a1 | coding | upstream | 139336 | 61724768 ~ 61753320 (+) |
| nupr1b | LOC106600745 | coding | downstream | 1749 | 61894747 ~ 61896190 (+) |
| doc2a | LOC106600746 | coding | downstream | 59292 | 61952290 ~ 62003086 (+) |
| LOC110537935 | LOC106600756 | coding | downstream | 277641 | 62170639 ~ 62185966 (+) |
| zgc:193811 | LOC106600757 | coding | downstream | 308352 | 62201350 ~ 62205293 (+) |
| kcnc3a | LOC106600760 | coding | downstream | 345006 | 62238004 ~ 62342939 (+) |
| G1095895 | NA | non-coding | upstream | 12289 | 61879864 ~ 61880367 (+) |
| G1095894 | NA | non-coding | upstream | 13038 | 61879311 ~ 61879618 (+) |
| G1095893 | NA | non-coding | upstream | 14227 | 61878171 ~ 61878429 (+) |
| G1095883 | NA | non-coding | upstream | 43376 | 61848076 ~ 61849280 (+) |
| G1095867 | NA | non-coding | upstream | 75947 | 61816420 ~ 61816709 (+) |
| G1095916 | NA | non-coding | downstream | 110230 | 62003228 ~ 62004373 (+) |
| G1095971 | NA | non-coding | downstream | 125418 | 62018416 ~ 62023397 (+) |
| G1095965 | NA | non-coding | downstream | 158140 | 62051138 ~ 62057299 (+) |
| G1095989 | NA | non-coding | downstream | 164558 | 62057556 ~ 62119496 (+) |
| G1095540 | NA | other | upstream | 540311 | 61037739 ~ 61352345 (+) |
| mmp25a | LOC106600705 | other | upstream | 927061 | 60931123 ~ 60965921 (+) |
| G1095209 | NA | other | upstream | 1073759 | 60816491 ~ 60818897 (+) |
| LOC110539079 | LOC106600700 | other | upstream | 1178644 | 60696612 ~ 60777061 (+) |
| G1095244 | LOC108238713 | other | upstream | 1506683 | 60385664 ~ 60385973 (+) |
| LOC118937701 | LOC100136295 | other | downstream | 553506 | 62441706 ~ 62448515 (+) |
| LOC100305204 | hebp2 | other | downstream | 1409493 | 63302491 ~ 63334694 (+) |
| LOC110538933 | LOC106600901 | other | downstream | 1995098 | 63888086 ~ 63908673 (+) |
| G1097063 | NA | other | downstream | 2243360 | 64136358 ~ 64136704 (+) |
| G1097116 | NA | other | downstream | 2335003 | 64228001 ~ 64228684 (+) |
