Gene
RNA
| Item | Value |
|---|---|
| gene id | G1098008 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 61894812 ~ 61896190 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nuclear protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1248780 | True | 867 | lncRNA | 0.44 | 3 | 61894812 | 61896190 |
61,892,400
61,892,800
61,893,200
61,893,600
61,894,000
61,894,400
61,894,800
61,895,200
61,895,600
61,896,000
61,896,400
61,896,800
61,897,200
61,897,600
61,898,000
61,898,400
61,898,800
61,899,200
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537921 | sgf29 | coding | downstream | 2257 | 61882680 ~ 61892555 (-) |
| LOC110537920 | nfatc2ip | coding | downstream | 21245 | 61867461 ~ 61873567 (-) |
| spns1 | LOC106600742 | coding | downstream | 28150 | 61833666 ~ 61866662 (-) |
| LOC118937697 | NA | coding | downstream | 94482 | 61772775 ~ 61800330 (-) |
| LOC110537915 | LOC106601018 | coding | downstream | 102368 | 61788631 ~ 61792444 (-) |
| LOC110537924 | LOC106600747 | coding | upstream | 107018 | 62003208 ~ 62006661 (-) |
| LOC110537925 | LOC106600748 | coding | upstream | 110645 | 62006835 ~ 62011339 (-) |
| LOC110537927 | LOC106600749 | coding | upstream | 122209 | 62018399 ~ 62037500 (-) |
| LOC110537928 | mvp | coding | upstream | 142142 | 62038332 ~ 62056939 (-) |
| LOC110537930 | fam57b | coding | upstream | 167150 | 62063340 ~ 62075904 (-) |
| G1098006 | NA | non-coding | downstream | 13369 | 61881012 ~ 61881443 (-) |
| G1098005 | NA | non-coding | downstream | 13816 | 61880594 ~ 61880996 (-) |
| G1098003 | NA | non-coding | downstream | 15271 | 61879281 ~ 61879541 (-) |
| G1098001 | NA | non-coding | downstream | 16849 | 61877078 ~ 61877963 (-) |
| G1098000 | NA | non-coding | downstream | 17806 | 61876765 ~ 61877006 (-) |
| G1098096 | NA | non-coding | upstream | 116570 | 62012760 ~ 62012960 (-) |
| G1098099 | NA | non-coding | upstream | 119831 | 62016021 ~ 62016235 (-) |
| G1098234 | NA | non-coding | upstream | 406632 | 62302822 ~ 62303826 (-) |
| G1098254 | NA | non-coding | upstream | 459119 | 62355309 ~ 62355896 (-) |
| G1097953 | sh2b1 | other | downstream | 86311 | 61803710 ~ 61808501 (-) |
| ypel3 | LOC103040367 | other | downstream | 281687 | 61602944 ~ 61613176 (-) |
| G1097852 | LOC106600701 | other | downstream | 301349 | 61591238 ~ 61593463 (-) |
| G1097817 | NA | other | downstream | 389978 | 61503960 ~ 61504834 (-) |
| LOC110539101 | NA | other | downstream | 650485 | 61144112 ~ 61244327 (-) |
| G1098154 | LOC106600756 | other | upstream | 286560 | 62182750 ~ 62185946 (-) |
| G1098256 | LOC106600954 | other | upstream | 592977 | 62380280 ~ 62490254 (-) |
| LOC110537983 | LOC106600926 | other | upstream | 1556925 | 63453115 ~ 63467479 (-) |
| lmx1al | LOC106600915 | other | upstream | 1767015 | 63659040 ~ 63685854 (-) |
| G1099090 | LOC105030512 | other | upstream | 2244272 | 64140462 ~ 64140912 (-) |
