G1098154 (LOC106600756)


Basic Information

Item Value
gene id G1098154
gene name LOC106600756
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 62182750 ~ 62185946 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1248940
taaaaataGCTTTCCATTTAATCATCACGTGTGATGTCTATGTGTTACTCTCTTAACAATCATGAACTGAGCTCTGATGATCAACCAAATGTAATCCTATAGCATAACACAATTACATTTGCTCTCCAACTTAATTACTTACATCACAGGAAGAAAATATGAGTAGATTCAGTAGATTCATATTCATATTGAATGAAAGCAATCACTTATTGTTGACAGTTTTAACATACTATTACAGTGCTTTTCACATACAATGAGAAGTGTAGTGGACATAGAATCCACTTTTAGTGTATGCCCTATAAGAAAATATAAAATGAaaggagaatgggagagagggataggaggagagagagggagaaggataggAGGTGTGTGGCCCCACCGGACAGTGCAGCACAGGTGACAGTGAGGTCAGAGTTATTCCCACTGGAGGAGAAGGTGACGAAGCCTGGTTGGTCAGTGCTGATCTGGCTCTTGATCCAGGCCTGGTACTGGGACACTCTGGCATACACTCCTGGAAAATTTGGTTTAGCACAGCTTACTCCGAAACTCACAACACCAGACTGGATCCAGACTAAGCCCGGTTTGCTCACTAGCGGCCCCCCTGAGTCTCCCTGACAGGAATCCTTTCCTCCTGCCAATAGACCAGCACAGATCATGTTGCCTGTGATTGAACCCACTCCAGCATAGAGACAGGTACACTTCCTGTTCCCCACTACTGGCAGCTCCACCTCCTGTAGGGTCTGGGGTGAGGGCAGGGACACTGAGGAGGAGAGGCCATGAGAGACAGGTCACCTTTTACCGATAAACCGTTGTATACATTTCTGATCTGCTCCAACT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1248940 True 840 TUCP 0.45 2 62182750 62185946
Loading

Neighbor

gene id symbol gene type direction distance location
taok2a LOC106600755 coding downstream 16447 62130582 ~ 62166303 (-)
cdipt cdipt coding downstream 55903 62117246 ~ 62126847 (-)
LOC110537932 LOC106600753 coding downstream 68288 62098756 ~ 62114462 (-)
LOC110537929 LOC106600752 coding downstream 84100 62076291 ~ 62098650 (-)
LOC110537930 fam57b coding downstream 106846 62063340 ~ 62075904 (-)
LOC110537938 LOC106600761 coding upstream 158603 62344549 ~ 62350793 (-)
LOC110537941 LOC106600765 coding upstream 194369 62380315 ~ 62383994 (-)
LOC110537954 LOC100136295 coding upstream 288733 62474679 ~ 62476811 (-)
LOC118937702 LOC106600954 coding upstream 302932 62488878 ~ 62490823 (-)
LOC110537944 LOC106600765 coding upstream 303108 62477005 ~ 62496977 (-)
LOC110537927 LOC106600749 non-coding downstream 159667 62018399 ~ 62037500 (-)
G1098099 NA non-coding downstream 166515 62016021 ~ 62016235 (-)
G1098096 NA non-coding downstream 169790 62012760 ~ 62012960 (-)
G1098008 NA non-coding downstream 286560 61894812 ~ 61896190 (-)
G1098006 NA non-coding downstream 301307 61881012 ~ 61881443 (-)
G1098234 NA non-coding upstream 116876 62302822 ~ 62303826 (-)
G1098254 NA non-coding upstream 169363 62355309 ~ 62355896 (-)
G1098236 NA non-coding upstream 178979 62364925 ~ 62365510 (-)
G1098256 LOC106600954 non-coding upstream 194334 62380280 ~ 62490254 (-)
G1098343 NA non-coding upstream 241982 62427928 ~ 62428292 (-)
G1097953 sh2b1 other downstream 374249 61803710 ~ 61808501 (-)
ypel3 LOC103040367 other downstream 569625 61602944 ~ 61613176 (-)
G1097852 LOC106600701 other downstream 589287 61591238 ~ 61593463 (-)
G1097817 NA other downstream 677916 61503960 ~ 61504834 (-)
G1097645 NA other downstream 858038 61038716 ~ 61324712 (-)
LOC110537983 LOC106600926 other upstream 1267169 63453115 ~ 63467479 (-)
lmx1al LOC106600915 other upstream 1477259 63659040 ~ 63685854 (-)
G1099090 LOC105030512 other upstream 1954516 64140462 ~ 64140912 (-)
G1099144 LOC105893191 other upstream 2035022 64220968 ~ 64221572 (-)

Expression

G1098154(LOC106600756) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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G1098154(LOC106600756) Expression in each Bioproject

Bar chart with 15 bars.
G1098154(LOC106600756) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
End of interactive chart.

Co-expression Network