Gene
RNA
| Item | Value |
|---|---|
| gene id | G1098256 |
| gene name | LOC106600954 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 62380280 ~ 62490254 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ferritin, middle subunit-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1249064 | False | 584 | lncRNA | 0.48 | 4 | 62380280 | 62490254 |
| TU1249058 | True | 440 | TUCP | 0.54 | 3 | 62489167 | 62490254 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537938 | LOC106600761 | coding | downstream | 29487 | 62344549 ~ 62350793 (-) |
| taok2a | LOC106600755 | coding | downstream | 213977 | 62130582 ~ 62166303 (-) |
| cdipt | cdipt | coding | downstream | 253433 | 62117246 ~ 62126847 (-) |
| LOC110537932 | LOC106600753 | coding | downstream | 265818 | 62098756 ~ 62114462 (-) |
| LOC110537929 | LOC106600752 | coding | downstream | 281630 | 62076291 ~ 62098650 (-) |
| LOC110537950 | LOC106600765 | coding | upstream | 26207 | 62516461 ~ 62518611 (-) |
| LOC118937705 | NA | coding | upstream | 111539 | 62601793 ~ 62606271 (-) |
| LOC118937704 | NA | coding | upstream | 158580 | 62648834 ~ 62654358 (-) |
| tnnt1 | LOC106600945 | coding | upstream | 264183 | 62754437 ~ 62768475 (-) |
| pih1d1 | pih1d1 | coding | upstream | 278766 | 62769020 ~ 62785527 (-) |
| G1098236 | NA | non-coding | downstream | 14770 | 62364925 ~ 62365510 (-) |
| G1098254 | NA | non-coding | downstream | 24384 | 62355309 ~ 62355896 (-) |
| G1098234 | NA | non-coding | downstream | 76454 | 62302822 ~ 62303826 (-) |
| LOC110537927 | LOC106600749 | non-coding | downstream | 357197 | 62018399 ~ 62037500 (-) |
| G1098099 | NA | non-coding | downstream | 364045 | 62016021 ~ 62016235 (-) |
| G1098377 | NA | non-coding | upstream | 49849 | 62540103 ~ 62540812 (-) |
| G1098268 | NA | non-coding | upstream | 55787 | 62546041 ~ 62686675 (-) |
| G1098395 | NA | non-coding | upstream | 88567 | 62578821 ~ 62617914 (-) |
| G1098406 | NA | non-coding | upstream | 106329 | 62596583 ~ 62645123 (-) |
| G1098261 | NA | non-coding | upstream | 108620 | 62598874 ~ 62656393 (-) |
| G1098154 | LOC106600756 | other | downstream | 194334 | 62182750 ~ 62185946 (-) |
| G1097953 | sh2b1 | other | downstream | 571779 | 61803710 ~ 61808501 (-) |
| ypel3 | LOC103040367 | other | downstream | 767155 | 61602944 ~ 61613176 (-) |
| G1097852 | LOC106600701 | other | downstream | 786817 | 61591238 ~ 61593463 (-) |
| G1097817 | NA | other | downstream | 875446 | 61503960 ~ 61504834 (-) |
| LOC110537983 | LOC106600926 | other | upstream | 962861 | 63453115 ~ 63467479 (-) |
| lmx1al | LOC106600915 | other | upstream | 1172951 | 63659040 ~ 63685854 (-) |
| G1099090 | LOC105030512 | other | upstream | 1650208 | 64140462 ~ 64140912 (-) |
| G1099144 | LOC105893191 | other | upstream | 1730714 | 64220968 ~ 64221572 (-) |
| G1099482 | LOC106600895 | other | upstream | 1836645 | 64326899 ~ 64332071 (-) |
| LOC110537954 | LOC100136295 | coding | downstream | 12356 | 62474679 ~ 62476811 (-) |
| LOC110537941 | LOC106600765 | coding | downstream | 105173 | 62380315 ~ 62383994 (-) |
| G1098286 | NA | non-coding | downstream | 17848 | 62462900 ~ 62471319 (-) |
| G1098260 | LOC100136295 | non-coding | downstream | 27539 | 62459156 ~ 62461628 (-) |
| G1098349 | NA | non-coding | downstream | 30683 | 62444938 ~ 62458484 (-) |
| G1098274 | NA | non-coding | downstream | 33287 | 62441703 ~ 62455880 (-) |
| G1098264 | NA | non-coding | downstream | 41811 | 62440124 ~ 62447356 (-) |
