Gene
RNA
| Item | Value |
|---|---|
| gene id | G1096422 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 62948128 ~ 62948364 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1246940 | True | 237 | lncRNA | 0.38 | 1 | 62948128 | 62948364 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| syt5a | LOC106600948 | coding | upstream | 198548 | 62733537 ~ 62749580 (+) |
| LOC110538929 | NA | coding | upstream | 215432 | 62726245 ~ 62732696 (+) |
| LOC110537946 | LOC106600765 | coding | upstream | 235007 | 62710478 ~ 62713121 (+) |
| LOC118936485 | LOC106600765 | coding | upstream | 264743 | 62679360 ~ 62683385 (+) |
| LOC100136293 | LOC106600765 | coding | upstream | 291729 | 62654545 ~ 62656399 (+) |
| prl | LOC100136792 | coding | downstream | 342 | 62948706 ~ 62952733 (+) |
| LOC110537969 | LOC106600937 | coding | downstream | 202462 | 63150826 ~ 63165217 (+) |
| LOC110537970 | LOC106600936 | coding | downstream | 224744 | 63173108 ~ 63181229 (+) |
| LOC110537972 | LOC106600934 | coding | downstream | 335451 | 63283815 ~ 63287720 (+) |
| LOC100305204 | hebp2 | coding | downstream | 354170 | 63302491 ~ 63334694 (+) |
| G1096408 | NA | non-coding | upstream | 13119 | 62934688 ~ 62935009 (+) |
| G1096407 | NA | non-coding | upstream | 15975 | 62931891 ~ 62932153 (+) |
| G1096406 | NA | non-coding | upstream | 17230 | 62916666 ~ 62930898 (+) |
| G1096401 | NA | non-coding | upstream | 39912 | 62905599 ~ 62908216 (+) |
| G1096393 | NA | non-coding | upstream | 52691 | 62894637 ~ 62895437 (+) |
| G1096431 | NA | non-coding | downstream | 10675 | 62959039 ~ 62959267 (+) |
| G1096433 | NA | non-coding | downstream | 148165 | 63096529 ~ 63103349 (+) |
| G1096539 | NA | non-coding | downstream | 187288 | 63135652 ~ 63135855 (+) |
| G1096570 | LOC106600935 | non-coding | downstream | 242732 | 63191096 ~ 63192057 (+) |
| G1096603 | NA | non-coding | downstream | 280365 | 63228729 ~ 63229110 (+) |
| LOC118937701 | LOC100136295 | other | upstream | 500654 | 62441706 ~ 62448515 (+) |
| G1095540 | NA | other | upstream | 1595783 | 61037739 ~ 61352345 (+) |
| mmp25a | LOC106600705 | other | upstream | 1982533 | 60931123 ~ 60965921 (+) |
| G1095209 | NA | other | upstream | 2129231 | 60816491 ~ 60818897 (+) |
| LOC110539079 | LOC106600700 | other | upstream | 2234116 | 60696612 ~ 60777061 (+) |
| LOC110538933 | LOC106600901 | other | downstream | 939732 | 63888086 ~ 63908673 (+) |
| G1097063 | NA | other | downstream | 1187994 | 64136358 ~ 64136704 (+) |
| G1097116 | NA | other | downstream | 1279637 | 64228001 ~ 64228684 (+) |
| G1097122 | NA | other | downstream | 1306248 | 64254612 ~ 64255064 (+) |
