Gene
RNA
| Item | Value |
|---|---|
| gene id | G1099592 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 64462834 ~ 64463037 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1250537 | True | 204 | lncRNA | 0.46 | 1 | 64462834 | 64463037 |
64,461,200
64,461,600
64,462,000
64,462,400
64,462,800
64,463,200
64,463,600
64,464,000
64,464,400
64,464,800
64,465,200
64,465,600
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mief1 | LOC106600887 | coding | downstream | 34891 | 64419382 ~ 64427943 (-) |
| LOC110538018 | LOC106600888 | coding | downstream | 66438 | 64386978 ~ 64396396 (-) |
| LOC110538017 | atf4 | coding | downstream | 77759 | 64383198 ~ 64385075 (-) |
| LOC110538015 | LOC106600892 | coding | downstream | 100840 | 64343445 ~ 64361994 (-) |
| LOC110538934 | LOC106607443 | coding | downstream | 124892 | 64331331 ~ 64337942 (-) |
| LOC110538027 | LOC106600973 | coding | upstream | 81463 | 64544500 ~ 64558035 (-) |
| LOC110538028 | LOC106600880 | coding | upstream | 122264 | 64585301 ~ 64624376 (-) |
| syngr1a | LOC106600879 | coding | upstream | 177494 | 64640531 ~ 64666913 (-) |
| fam171a2a | LOC106600878 | coding | upstream | 204371 | 64667408 ~ 64731869 (-) |
| itga2b | LOC106600877 | coding | upstream | 269043 | 64732080 ~ 64746292 (-) |
| G1099574 | LOC106607449 | non-coding | downstream | 24434 | 64437298 ~ 64438400 (-) |
| G1099572 | NA | non-coding | downstream | 30650 | 64431834 ~ 64432184 (-) |
| G1099540 | NA | non-coding | downstream | 82378 | 64379896 ~ 64380456 (-) |
| G1099532 | NA | non-coding | downstream | 96936 | 64365670 ~ 64365898 (-) |
| G1099515 | NA | non-coding | downstream | 124116 | 64338368 ~ 64338718 (-) |
| G1099595 | NA | non-coding | upstream | 6126 | 64469163 ~ 64525829 (-) |
| G1099600 | NA | non-coding | upstream | 13931 | 64476968 ~ 64477706 (-) |
| G1099606 | il2rb1 | non-coding | upstream | 22036 | 64485073 ~ 64490665 (-) |
| G1099608 | NA | non-coding | upstream | 31078 | 64494115 ~ 64580915 (-) |
| G1099791 | NA | non-coding | upstream | 335996 | 64799033 ~ 64799265 (-) |
| G1099535 | NA | other | downstream | 95064 | 64367415 ~ 64367770 (-) |
| G1099482 | LOC106600895 | other | downstream | 130763 | 64326899 ~ 64332071 (-) |
| G1099144 | LOC105893191 | other | downstream | 241262 | 64220968 ~ 64221572 (-) |
| G1099090 | LOC105030512 | other | downstream | 321922 | 64140462 ~ 64140912 (-) |
| lmx1al | LOC106600915 | other | downstream | 777025 | 63659040 ~ 63685854 (-) |
| G1099816 | NA | other | upstream | 355342 | 64818379 ~ 64818729 (-) |
| LOC118937713 | ifn1 | other | upstream | 1437336 | 65900373 ~ 65904872 (-) |
| G1101510 | NA | other | upstream | 1723822 | 66186859 ~ 66187244 (-) |
| LOC110538067 | LOC106607530 | other | upstream | 1756079 | 66219116 ~ 66223229 (-) |
| G1102331 | psd3 | other | upstream | 2202252 | 66665289 ~ 66666338 (-) |
