G1099336


Basic Information

Item Value
gene id G1099336
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 64560649 ~ 64566188 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1250255
caATCGATgtcttgtctcagcctccagtatttatgcttcagtagtttatgtgtcggggggctagggtcagtttgttatatctggagtacttctcctgtcctatttggtgtcctgtgtgaatttaagtgtgctctctctaattctctctttctctctttctctctctcggaggacctgagccctaggaccatgcctcaggactacctgacatgatgactccttgctgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctgatcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacaccggcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagggctatataaataaatttgatttgatgactagaaagccggtgacgccgaccgccgaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1250255 True 592 lncRNA 0.48 2 64560649 64566188

Neighbor

gene id symbol gene type direction distance location
c1qtnf6a c1qtnf6 coding upstream 23250 64522838 ~ 64537399 (+)
il2rb il2rb1 coding upstream 69988 64485078 ~ 64490661 (+)
LOC110539154 tex33 coding upstream 82524 64475712 ~ 64478125 (+)
LOC110538025 LOC105029658 coding upstream 85238 64470116 ~ 64475411 (+)
LOC110538023 LOC106600884 coding upstream 99532 64459297 ~ 64461117 (+)
crhr1 LOC106600876 coding downstream 384843 64951031 ~ 65117379 (+)
cdc27 LOC106600875 coding downstream 684266 65250454 ~ 65283926 (+)
kansl1b LOC106600871 coding downstream 721475 65287663 ~ 65369708 (+)
scn4ab LOC106600868 coding downstream 894342 65460530 ~ 65496809 (+)
gh1 gh1 coding downstream 951041 65517229 ~ 65521363 (+)
G1099325 LOC106600973 non-coding upstream 12400 64544508 ~ 64548249 (+)
G1099280 LOC105030512 non-coding upstream 97889 64462394 ~ 64462760 (+)
G1099258 LOC106600887 non-coding upstream 133927 64425645 ~ 64426722 (+)
G1099241 NA non-coding upstream 182138 64378311 ~ 64378511 (+)
G1099187 LOC106600892 non-coding upstream 200787 64349651 ~ 64359862 (+)
G1099326 LOC106600880 non-coding downstream 22791 64588979 ~ 64613235 (+)
G1099365 NA non-coding downstream 48465 64614653 ~ 64614954 (+)
G1099377 NA non-coding downstream 70020 64636208 ~ 64652489 (+)
G1099811 NA non-coding downstream 249858 64816046 ~ 64816343 (+)
G1099815 NA non-coding downstream 252239 64818427 ~ 64818773 (+)
si:dkey-110g7.8 LOC106600891 other upstream 184435 64369958 ~ 64376356 (+)
G1097122 NA other upstream 305585 64254612 ~ 64255064 (+)
G1097116 NA other upstream 331965 64228001 ~ 64228684 (+)
G1097063 NA other upstream 423945 64136358 ~ 64136704 (+)
LOC110538933 LOC106600901 other upstream 670092 63888086 ~ 63908673 (+)
G1100432 NA other downstream 866952 65433140 ~ 65433457 (+)
LOC110538063 abi1 other downstream 1583021 66148710 ~ 66168256 (+)
LOC110538072 psd3 other downstream 2095776 66661875 ~ 66670815 (+)
G1101805 NA other downstream 2158473 66724661 ~ 66822261 (+)
G1102021 NA other downstream 2492547 67058735 ~ 67059407 (+)

Expression


Co-expression Network