Gene
RNA
| Item | Value |
|---|---|
| gene id | G1099326 |
| gene name | LOC106600880 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 64588979 ~ 64613235 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1250244 | True | 601 | lncRNA | 0.52 | 2 | 64588979 | 64613235 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| c1qtnf6a | c1qtnf6 | coding | upstream | 51580 | 64522838 ~ 64537399 (+) |
| il2rb | il2rb1 | coding | upstream | 98318 | 64485078 ~ 64490661 (+) |
| LOC110539154 | tex33 | coding | upstream | 110854 | 64475712 ~ 64478125 (+) |
| LOC110538025 | LOC105029658 | coding | upstream | 113568 | 64470116 ~ 64475411 (+) |
| LOC110538023 | LOC106600884 | coding | upstream | 127862 | 64459297 ~ 64461117 (+) |
| crhr1 | LOC106600876 | coding | downstream | 337796 | 64951031 ~ 65117379 (+) |
| cdc27 | LOC106600875 | coding | downstream | 637219 | 65250454 ~ 65283926 (+) |
| kansl1b | LOC106600871 | coding | downstream | 674428 | 65287663 ~ 65369708 (+) |
| scn4ab | LOC106600868 | coding | downstream | 847295 | 65460530 ~ 65496809 (+) |
| gh1 | gh1 | coding | downstream | 903994 | 65517229 ~ 65521363 (+) |
| G1099336 | NA | non-coding | upstream | 22791 | 64560649 ~ 64566188 (+) |
| G1099325 | LOC106600973 | non-coding | upstream | 40730 | 64544508 ~ 64548249 (+) |
| G1099280 | LOC105030512 | non-coding | upstream | 126219 | 64462394 ~ 64462760 (+) |
| G1099258 | LOC106600887 | non-coding | upstream | 162257 | 64425645 ~ 64426722 (+) |
| G1099241 | NA | non-coding | upstream | 210468 | 64378311 ~ 64378511 (+) |
| G1099365 | NA | non-coding | downstream | 1418 | 64614653 ~ 64614954 (+) |
| G1099377 | NA | non-coding | downstream | 22973 | 64636208 ~ 64652489 (+) |
| G1099811 | NA | non-coding | downstream | 202811 | 64816046 ~ 64816343 (+) |
| G1099815 | NA | non-coding | downstream | 205192 | 64818427 ~ 64818773 (+) |
| G1099821 | NA | non-coding | downstream | 208725 | 64821960 ~ 64822195 (+) |
| si:dkey-110g7.8 | LOC106600891 | other | upstream | 212765 | 64369958 ~ 64376356 (+) |
| G1097122 | NA | other | upstream | 333915 | 64254612 ~ 64255064 (+) |
| G1097116 | NA | other | upstream | 360295 | 64228001 ~ 64228684 (+) |
| G1097063 | NA | other | upstream | 452275 | 64136358 ~ 64136704 (+) |
| LOC110538933 | LOC106600901 | other | upstream | 698422 | 63888086 ~ 63908673 (+) |
| G1100432 | NA | other | downstream | 819905 | 65433140 ~ 65433457 (+) |
| LOC110538063 | abi1 | other | downstream | 1535974 | 66148710 ~ 66168256 (+) |
| LOC110538072 | psd3 | other | downstream | 2048729 | 66661875 ~ 66670815 (+) |
| G1101805 | NA | other | downstream | 2111426 | 66724661 ~ 66822261 (+) |
| G1102021 | NA | other | downstream | 2445500 | 67058735 ~ 67059407 (+) |
