Gene
RNA
| Item | Value |
|---|---|
| gene id | G1099791 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 64799033 ~ 64799265 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1250745 | True | 233 | lncRNA | 0.34 | 1 | 64799033 | 64799265 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538935 | LOC106600972 | coding | downstream | 49982 | 64746846 ~ 64749051 (-) |
| itga2b | LOC106600877 | coding | downstream | 52741 | 64732080 ~ 64746292 (-) |
| fam171a2a | LOC106600878 | coding | downstream | 67164 | 64667408 ~ 64731869 (-) |
| syngr1a | LOC106600879 | coding | downstream | 132120 | 64640531 ~ 64666913 (-) |
| LOC110538028 | LOC106600880 | coding | downstream | 174657 | 64585301 ~ 64624376 (-) |
| LOC110538032 | LOC106600971 | coding | upstream | 430227 | 65229492 ~ 65233281 (-) |
| LOC110539155 | NA | coding | upstream | 434205 | 65233470 ~ 65234629 (-) |
| maptb | LOC106600872 | coding | upstream | 570598 | 65369863 ~ 65410820 (-) |
| myl4 | LOC106600870 | coding | upstream | 618795 | 65418060 ~ 65422031 (-) |
| LOC110538053 | LOC106600970 | coding | upstream | 753027 | 65552292 ~ 65553298 (-) |
| G1099608 | NA | non-coding | downstream | 218118 | 64494115 ~ 64580915 (-) |
| G1099595 | NA | non-coding | downstream | 273204 | 64469163 ~ 64525829 (-) |
| G1099606 | il2rb1 | non-coding | downstream | 308368 | 64485073 ~ 64490665 (-) |
| G1099600 | NA | non-coding | downstream | 321327 | 64476968 ~ 64477706 (-) |
| G1099592 | NA | non-coding | downstream | 335996 | 64462834 ~ 64463037 (-) |
| G1099808 | NA | non-coding | upstream | 14020 | 64813285 ~ 64813588 (-) |
| G1099835 | NA | non-coding | upstream | 30530 | 64829795 ~ 64830074 (-) |
| G1099850 | NA | non-coding | upstream | 44590 | 64843855 ~ 64844169 (-) |
| G1099855 | NA | non-coding | upstream | 46426 | 64845691 ~ 64845903 (-) |
| G1099877 | NA | non-coding | upstream | 63100 | 64862365 ~ 64862581 (-) |
| G1099535 | NA | other | downstream | 431263 | 64367415 ~ 64367770 (-) |
| G1099482 | LOC106600895 | other | downstream | 466962 | 64326899 ~ 64332071 (-) |
| G1099144 | LOC105893191 | other | downstream | 577461 | 64220968 ~ 64221572 (-) |
| G1099090 | LOC105030512 | other | downstream | 658121 | 64140462 ~ 64140912 (-) |
| lmx1al | LOC106600915 | other | downstream | 1113224 | 63659040 ~ 63685854 (-) |
| G1099816 | NA | other | upstream | 19114 | 64818379 ~ 64818729 (-) |
| LOC118937713 | ifn1 | other | upstream | 1101108 | 65900373 ~ 65904872 (-) |
| G1101510 | NA | other | upstream | 1387594 | 66186859 ~ 66187244 (-) |
| LOC110538067 | LOC106607530 | other | upstream | 1419851 | 66219116 ~ 66223229 (-) |
| G1102331 | psd3 | other | upstream | 1866024 | 66665289 ~ 66666338 (-) |
