Gene
RNA
| Item | Value |
|---|---|
| gene id | G1100365 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 65253637 ~ 65253891 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1251327 | True | 255 | lncRNA | 0.34 | 1 | 65253637 | 65253891 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| crhr1 | LOC106600876 | coding | upstream | 136258 | 64951031 ~ 65117379 (+) |
| c1qtnf6a | c1qtnf6 | coding | upstream | 716238 | 64522838 ~ 64537399 (+) |
| il2rb | il2rb1 | coding | upstream | 762976 | 64485078 ~ 64490661 (+) |
| LOC110539154 | tex33 | coding | upstream | 775512 | 64475712 ~ 64478125 (+) |
| LOC110538025 | LOC105029658 | coding | upstream | 778226 | 64470116 ~ 64475411 (+) |
| kansl1b | LOC106600871 | coding | downstream | 33772 | 65287663 ~ 65369708 (+) |
| scn4ab | LOC106600868 | coding | downstream | 206639 | 65460530 ~ 65496809 (+) |
| gh1 | gh1 | coding | downstream | 263338 | 65517229 ~ 65521363 (+) |
| rdm1 | rdm1 | coding | downstream | 272681 | 65526572 ~ 65534174 (+) |
| ifn3 | ifn3 | coding | downstream | 394044 | 65647935 ~ 65649954 (+) |
| G1100357 | NA | non-coding | upstream | 11304 | 65242115 ~ 65242333 (+) |
| G1100348 | NA | non-coding | upstream | 19782 | 65233535 ~ 65233855 (+) |
| G1100347 | NA | non-coding | upstream | 20286 | 65233115 ~ 65233351 (+) |
| G1100343 | NA | non-coding | upstream | 25419 | 65227968 ~ 65228218 (+) |
| G1100309 | NA | non-coding | upstream | 73084 | 65180214 ~ 65180553 (+) |
| G1100368 | NA | non-coding | downstream | 1275 | 65255166 ~ 65255373 (+) |
| G1100374 | LOC106612182 | non-coding | downstream | 12052 | 65265943 ~ 65266165 (+) |
| G1100441 | NA | non-coding | downstream | 189008 | 65442899 ~ 65443140 (+) |
| G1100443 | NA | non-coding | downstream | 196338 | 65450229 ~ 65450569 (+) |
| si:dkey-110g7.8 | LOC106600891 | other | upstream | 877423 | 64369958 ~ 64376356 (+) |
| G1097122 | NA | other | upstream | 998573 | 64254612 ~ 64255064 (+) |
| G1097116 | NA | other | upstream | 1024953 | 64228001 ~ 64228684 (+) |
| G1097063 | NA | other | upstream | 1116933 | 64136358 ~ 64136704 (+) |
| LOC110538933 | LOC106600901 | other | upstream | 1363080 | 63888086 ~ 63908673 (+) |
| G1100432 | NA | other | downstream | 179249 | 65433140 ~ 65433457 (+) |
| LOC110538063 | abi1 | other | downstream | 895318 | 66148710 ~ 66168256 (+) |
| LOC110538072 | psd3 | other | downstream | 1408073 | 66661875 ~ 66670815 (+) |
| G1101805 | NA | other | downstream | 1470770 | 66724661 ~ 66822261 (+) |
| G1102021 | NA | other | downstream | 1804844 | 67058735 ~ 67059407 (+) |
