Gene
RNA
| Item | Value |
|---|---|
| gene id | G1100708 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 65483885 ~ 65547640 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1251696 | True | 510 | lncRNA | 0.38 | 2 | 65483885 | 65547640 |
65,420,000
65,430,000
65,440,000
65,450,000
65,460,000
65,470,000
65,480,000
65,490,000
65,500,000
65,510,000
65,520,000
65,530,000
65,540,000
65,550,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| myl4 | LOC106600870 | coding | downstream | 61854 | 65418060 ~ 65422031 (-) |
| maptb | LOC106600872 | coding | downstream | 73065 | 65369863 ~ 65410820 (-) |
| LOC110539155 | NA | coding | downstream | 249256 | 65233470 ~ 65234629 (-) |
| LOC110538032 | LOC106600971 | coding | downstream | 250604 | 65229492 ~ 65233281 (-) |
| LOC110538935 | LOC106600972 | coding | downstream | 734834 | 64746846 ~ 64749051 (-) |
| LOC110538053 | LOC106600970 | coding | upstream | 4652 | 65552292 ~ 65553298 (-) |
| LOC118937708 | LOC106600964 | coding | upstream | 15293 | 65562933 ~ 65564494 (-) |
| LOC110538047 | LOC106600965 | coding | upstream | 22083 | 65569723 ~ 65570729 (-) |
| LOC110538045 | LOC106600965 | coding | upstream | 27129 | 65574769 ~ 65581381 (-) |
| LOC110510821 | ifn3 | coding | upstream | 43158 | 65590798 ~ 65592721 (-) |
| G1100734 | LOC106600868 | non-coding | downstream | 2948 | 65478405 ~ 65480937 (-) |
| G1100701 | NA | non-coding | downstream | 45357 | 65438258 ~ 65438528 (-) |
| G1100604 | NA | non-coding | downstream | 91324 | 65391838 ~ 65392561 (-) |
| G1100590 | NA | non-coding | downstream | 219889 | 65263792 ~ 65263996 (-) |
| G1100577 | NA | non-coding | downstream | 230055 | 65253627 ~ 65253830 (-) |
| G1101060 | NA | non-coding | upstream | 154510 | 65702150 ~ 65702376 (-) |
| G1101061 | NA | non-coding | upstream | 154960 | 65702600 ~ 65721211 (-) |
| G1101093 | NA | non-coding | upstream | 199648 | 65747288 ~ 65804344 (-) |
| G1101049 | NA | non-coding | upstream | 227657 | 65775297 ~ 65981932 (-) |
| G1101112 | NA | non-coding | upstream | 242211 | 65789851 ~ 65882236 (-) |
| G1099816 | NA | other | downstream | 665156 | 64818379 ~ 64818729 (-) |
| G1099535 | NA | other | downstream | 1116115 | 64367415 ~ 64367770 (-) |
| G1099482 | LOC106600895 | other | downstream | 1151814 | 64326899 ~ 64332071 (-) |
| G1099144 | LOC105893191 | other | downstream | 1262313 | 64220968 ~ 64221572 (-) |
| G1099090 | LOC105030512 | other | downstream | 1342973 | 64140462 ~ 64140912 (-) |
| LOC118937713 | ifn1 | other | upstream | 352733 | 65900373 ~ 65904872 (-) |
| G1101510 | NA | other | upstream | 639219 | 66186859 ~ 66187244 (-) |
| LOC110538067 | LOC106607530 | other | upstream | 671476 | 66219116 ~ 66223229 (-) |
| G1102331 | psd3 | other | upstream | 1117649 | 66665289 ~ 66666338 (-) |
| LOC110539163 | NA | other | upstream | 1351156 | 66898754 ~ 66914768 (-) |
