Gene
RNA
| Item | Value |
|---|---|
| gene id | G1100472 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 65524903 ~ 65532871 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1251441 | True | 861 | lncRNA | 0.41 | 2 | 65524903 | 65532871 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gh1 | gh1 | coding | upstream | 3540 | 65517229 ~ 65521363 (+) |
| scn4ab | LOC106600868 | coding | upstream | 28094 | 65460530 ~ 65496809 (+) |
| kansl1b | LOC106600871 | coding | upstream | 155195 | 65287663 ~ 65369708 (+) |
| cdc27 | LOC106600875 | coding | upstream | 240977 | 65250454 ~ 65283926 (+) |
| crhr1 | LOC106600876 | coding | upstream | 407524 | 64951031 ~ 65117379 (+) |
| ifn3 | ifn3 | coding | downstream | 115064 | 65647935 ~ 65649954 (+) |
| LOC118937709 | LOC106600970 | coding | downstream | 129861 | 65662732 ~ 65663781 (+) |
| LOC110538937 | LOC106600965 | coding | downstream | 136431 | 65669302 ~ 65670295 (+) |
| ifnphi1 | LOC106600969 | coding | downstream | 142129 | 65675000 ~ 65676578 (+) |
| ifn1 | ifn1 | coding | downstream | 173560 | 65706431 ~ 65710575 (+) |
| G1100443 | NA | non-coding | upstream | 74334 | 65450229 ~ 65450569 (+) |
| G1100441 | NA | non-coding | upstream | 81763 | 65442899 ~ 65443140 (+) |
| G1100374 | LOC106612182 | non-coding | upstream | 258738 | 65265943 ~ 65266165 (+) |
| G1100368 | NA | non-coding | upstream | 269530 | 65255166 ~ 65255373 (+) |
| G1100800 | NA | non-coding | downstream | 42748 | 65575619 ~ 65597668 (+) |
| G1100821 | NA | non-coding | downstream | 76707 | 65609578 ~ 65617409 (+) |
| LOC110538052 | ifn1 | non-coding | downstream | 274052 | 65802490 ~ 65807617 (+) |
| G1101009 | NA | non-coding | downstream | 326949 | 65859820 ~ 65971064 (+) |
| G1101013 | NA | non-coding | downstream | 332661 | 65865532 ~ 65893566 (+) |
| G1100432 | NA | other | upstream | 91446 | 65433140 ~ 65433457 (+) |
| si:dkey-110g7.8 | LOC106600891 | other | upstream | 1148689 | 64369958 ~ 64376356 (+) |
| G1097122 | NA | other | upstream | 1269839 | 64254612 ~ 64255064 (+) |
| G1097116 | NA | other | upstream | 1296219 | 64228001 ~ 64228684 (+) |
| G1097063 | NA | other | upstream | 1388199 | 64136358 ~ 64136704 (+) |
| LOC110538063 | abi1 | other | downstream | 616338 | 66148710 ~ 66168256 (+) |
| LOC110538072 | psd3 | other | downstream | 1129093 | 66661875 ~ 66670815 (+) |
| G1101805 | NA | other | downstream | 1191790 | 66724661 ~ 66822261 (+) |
| G1102021 | NA | other | downstream | 1525864 | 67058735 ~ 67059407 (+) |
| G1102115 | NA | other | downstream | 1692481 | 67225352 ~ 67225799 (+) |
