G1101754


Basic Information

Item Value
gene id G1101754
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 66590178 ~ 66590937 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1252852
TCTCTGGGTCCAACAAAACAGATACTAAGCCAGCAGTCAACCACTCTGTCACCCACTTCCTTGTTGCAGAGTATACAGACTGTGGGAAATACAGCTGCAGCTATTGGAGTCAACATCTCTACCTGGTCATTCAGGTCGGCTACTAGGGAACTAGCTGTCACCATTAGAGGTACTGACACCAGACACTACAGAGGGGAGGACaacgaagaggaggaagaggaggactaTGTGAACGTTGAAAACGTCTGCTATGACAGAGGtctggagagagagtgaagg

Function

NR:

description
uncharacterized protein LOC109898308 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1252852 True 279 lncRNA 0.49 2 66590178 66590937

Neighbor

gene id symbol gene type direction distance location
LOC110538074 LOC106600856 coding upstream 29748 66544145 ~ 66560430 (+)
LOC110538943 NA coding upstream 63324 66505512 ~ 66526854 (+)
rarab LOC106600859 coding upstream 104320 66302788 ~ 66485858 (+)
LOC110538063 abi1 coding upstream 421922 66148710 ~ 66168256 (+)
LOC110538064 NA coding upstream 441573 66147126 ~ 66148605 (+)
LOC110538075 LOC106600854 coding downstream 53090 66644027 ~ 66653962 (+)
LOC110538072 psd3 coding downstream 70938 66661875 ~ 66670815 (+)
LOC110538077 LOC106600959 coding downstream 83198 66674135 ~ 66678665 (+)
LOC110538082 LOC106600849 coding downstream 417076 67008013 ~ 67027138 (+)
LOC110538084 LOC106600841 coding downstream 557864 67148801 ~ 67164013 (+)
G1101698 NA non-coding upstream 86385 66487046 ~ 66503793 (+)
G1101697 NA non-coding upstream 103306 66486582 ~ 66486872 (+)
G1101696 NA non-coding upstream 103643 66486050 ~ 66486535 (+)
G1101692 NA non-coding upstream 112385 66477269 ~ 66477793 (+)
G1101767 NA non-coding downstream 16432 66607369 ~ 66679468 (+)
G1101805 NA non-coding downstream 133724 66724661 ~ 66822261 (+)
G1101907 NA non-coding downstream 274857 66865794 ~ 66866034 (+)
G1101908 NA non-coding downstream 277494 66868431 ~ 66868632 (+)
G1101909 NA non-coding downstream 279344 66870281 ~ 66870569 (+)
G1100432 NA other upstream 1156721 65433140 ~ 65433457 (+)
si:dkey-110g7.8 LOC106600891 other upstream 2213964 64369958 ~ 64376356 (+)
G1097122 NA other upstream 2335114 64254612 ~ 64255064 (+)
G1097116 NA other upstream 2361494 64228001 ~ 64228684 (+)
G1102021 NA other downstream 467798 67058735 ~ 67059407 (+)
G1102115 NA other downstream 634415 67225352 ~ 67225799 (+)
LOC110538103 LOC106600823 other downstream 1214412 67793428 ~ 67810071 (+)

Expression


Co-expression Network