Gene
RNA
| Item | Value |
|---|---|
| gene id | G1102501 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 66914849 ~ 66922557 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1253647 | False | 1539 | lncRNA | 0.36 | 3 | 66914849 | 66917791 |
| TU1253649 | True | 2655 | TUCP | 0.44 | 2 | 66914849 | 66922557 |
66,908,000
66,909,000
66,910,000
66,911,000
66,912,000
66,913,000
66,914,000
66,915,000
66,916,000
66,917,000
66,918,000
66,919,000
66,920,000
66,921,000
66,922,000
66,923,000
66,924,000
66,925,000
66,926,000
66,927,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110539163 | NA | coding | downstream | 11623 | 66898754 ~ 66914768 (-) |
| col1a1 | col1a1 | coding | downstream | 128998 | 66764747 ~ 66785851 (-) |
| LOC110538071 | LOC106600853 | coding | downstream | 161228 | 66693234 ~ 66753621 (-) |
| LOC110538069 | LOC106600960 | coding | downstream | 666468 | 66247414 ~ 66248381 (-) |
| LOC110538067 | LOC106607530 | coding | downstream | 691620 | 66219116 ~ 66223229 (-) |
| LOC110486154 | LOC106600851 | coding | upstream | 7536 | 66925327 ~ 66959705 (-) |
| LOC110538080 | LOC106600850 | coding | upstream | 75520 | 66993311 ~ 67001032 (-) |
| LOC110538081 | LOC106600847 | coding | upstream | 109355 | 67027146 ~ 67052479 (-) |
| LOC110538083 | LOC106600846 | coding | upstream | 146835 | 67064626 ~ 67071678 (-) |
| LOC118937719 | LOC106600845 | coding | upstream | 189819 | 67107610 ~ 67113681 (-) |
| G1102498 | NA | non-coding | downstream | 46970 | 66867647 ~ 66867879 (-) |
| G1102495 | NA | non-coding | downstream | 50407 | 66864174 ~ 66864442 (-) |
| G1102493 | NA | non-coding | downstream | 52777 | 66861808 ~ 66862072 (-) |
| G1102405 | NA | non-coding | downstream | 180308 | 66684521 ~ 66734541 (-) |
| G1102527 | NA | non-coding | upstream | 6412 | 66924203 ~ 66925119 (-) |
| G1102544 | NA | non-coding | upstream | 46205 | 66963996 ~ 66964235 (-) |
| G1102549 | NA | non-coding | upstream | 51972 | 66969763 ~ 66970087 (-) |
| G1102553 | NA | non-coding | upstream | 58182 | 66975973 ~ 66976219 (-) |
| G1102559 | NA | non-coding | upstream | 68711 | 66986502 ~ 66986733 (-) |
| G1102331 | psd3 | other | downstream | 248511 | 66665289 ~ 66666338 (-) |
| G1101510 | NA | other | downstream | 727605 | 66186859 ~ 66187244 (-) |
| LOC118937713 | ifn1 | other | downstream | 1012508 | 65900373 ~ 65904872 (-) |
| G1102725 | LOC100136012 | other | upstream | 350294 | 67268085 ~ 67268646 (-) |
| LOC110538090 | hoxb4aa | other | upstream | 549147 | 67465455 ~ 67469743 (-) |
| LOC110538092 | hoxb6aa | other | upstream | 568937 | 67486521 ~ 67489383 (-) |
