G1101974



Basic Information


Item Value
gene id G1101974
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 66979929 ~ 66980158 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1253085
gcagtagacACTTGTCGACAAGCCTTATGTAGAGTGGTGGAAAGAATCAGGGAACATCATTCCATTGCTACTGTCCTTACAGCACAGACCTGGTAGTTTCCAGAGATTTTCTTATGTCAAGAGACAAGTACGGGACCCAATGCTGTATTCCTGGAAACCCTTTGCTTTTCCTGTCAACCTGTCAAGGAAGTGATATTTATGTCAATGTATCTTTGAATCCACCCTAAGGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1253085 True 230 lncRNA 0.43 1 66979929 66980158

Neighbor


gene id symbol gene type direction distance location
LOC110538077 LOC106600959 coding upstream 301264 66674135 ~ 66678665 (+)
LOC110538072 psd3 coding upstream 309114 66661875 ~ 66670815 (+)
LOC110538075 LOC106600854 coding upstream 325967 66644027 ~ 66653962 (+)
LOC110538073 LOC106600855 coding upstream 346415 66589702 ~ 66633514 (+)
LOC110538074 LOC106600856 coding upstream 419499 66544145 ~ 66560430 (+)
LOC110538082 LOC106600849 coding downstream 27855 67008013 ~ 67027138 (+)
LOC110538084 LOC106600841 coding downstream 168643 67148801 ~ 67164013 (+)
LOC118937895 NA coding downstream 300805 67280963 ~ 67292113 (+)
LOC110538094 NA coding downstream 500904 67481062 ~ 67491128 (+)
LOC110538945 LOC106607489 coding downstream 591066 67571224 ~ 67574023 (+)
G1101973 NA non-coding upstream 585 66979116 ~ 66979344 (+)
G1101969 NA non-coding upstream 5468 66974164 ~ 66974461 (+)
G1101967 NA non-coding upstream 7408 66972234 ~ 66972521 (+)
G1101966 NA non-coding upstream 8346 66971354 ~ 66971583 (+)
G1101963 NA non-coding upstream 11673 66967973 ~ 66968256 (+)
G1101979 NA non-coding downstream 4022 66984180 ~ 66985004 (+)
G1101980 NA non-coding downstream 5119 66985277 ~ 66985644 (+)
G1101984 NA non-coding downstream 13159 66993317 ~ 67001003 (+)
G1101998 NA non-coding downstream 35930 67016088 ~ 67016428 (+)
G1102021 NA non-coding downstream 78887 67058735 ~ 67059407 (+)
G1101805 NA other upstream 208538 66724661 ~ 66822261 (+)
LOC110538063 abi1 other upstream 811732 66148710 ~ 66168256 (+)
G1100432 NA other upstream 1546472 65433140 ~ 65433457 (+)
si:dkey-110g7.8 LOC106600891 other upstream 2603715 64369958 ~ 64376356 (+)
G1102115 NA other downstream 245194 67225352 ~ 67225799 (+)
LOC110538103 LOC106600823 other downstream 825191 67793428 ~ 67810071 (+)
G1103416 eif1b other downstream 1007536 67987694 ~ 68048717 (+)
G1104149 LOC106600798 other downstream 1523883 68504041 ~ 68505295 (+)

Expression



Co-expression Network