G1101980


Basic Information

Item Value
gene id G1101980
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 66985277 ~ 66985644 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1253091
tacagttgaagtttgaagtttacatacacttacgtttgagtcattaaaacttgtttttcaaccactccacaaatttcttgttaacaaactgtaggtttggcaagtcggttaagacatctactttgtgcatgacacaagtcatttttccaacaattgtttacagacagattatttcacttttaattcactgtatcacaattccagtgggtcagaagtttacatacactaagttgactgtacatttaaacagcttggaaaattccagaaaatgatgtcatggctttagaagcttctgacatcatttgagtcaattggaggtgtacctgtggatgtatttcatggactaccttcaaactcagtgcctcttt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1253091 True 368 lncRNA 0.35 1 66985277 66985644

Neighbor

gene id symbol gene type direction distance location
LOC110538077 LOC106600959 coding upstream 306612 66674135 ~ 66678665 (+)
LOC110538072 psd3 coding upstream 314462 66661875 ~ 66670815 (+)
LOC110538075 LOC106600854 coding upstream 331315 66644027 ~ 66653962 (+)
LOC110538073 LOC106600855 coding upstream 351763 66589702 ~ 66633514 (+)
LOC110538074 LOC106600856 coding upstream 424847 66544145 ~ 66560430 (+)
LOC110538082 LOC106600849 coding downstream 22369 67008013 ~ 67027138 (+)
LOC110538084 LOC106600841 coding downstream 163157 67148801 ~ 67164013 (+)
LOC118937895 NA coding downstream 295319 67280963 ~ 67292113 (+)
LOC110538094 NA coding downstream 495418 67481062 ~ 67491128 (+)
LOC110538945 LOC106607489 coding downstream 585580 67571224 ~ 67574023 (+)
G1101979 NA non-coding upstream 273 66984180 ~ 66985004 (+)
G1101974 NA non-coding upstream 5119 66979929 ~ 66980158 (+)
G1101973 NA non-coding upstream 5933 66979116 ~ 66979344 (+)
G1101969 NA non-coding upstream 10816 66974164 ~ 66974461 (+)
G1101967 NA non-coding upstream 12756 66972234 ~ 66972521 (+)
G1101984 NA non-coding downstream 7673 66993317 ~ 67001003 (+)
G1101998 NA non-coding downstream 30444 67016088 ~ 67016428 (+)
G1102021 NA non-coding downstream 73401 67058735 ~ 67059407 (+)
G1102022 NA non-coding downstream 76018 67061662 ~ 67061889 (+)
G1102024 NA non-coding downstream 77247 67062891 ~ 67063127 (+)
G1101805 NA other upstream 213886 66724661 ~ 66822261 (+)
LOC110538063 abi1 other upstream 817080 66148710 ~ 66168256 (+)
G1100432 NA other upstream 1551820 65433140 ~ 65433457 (+)
si:dkey-110g7.8 LOC106600891 other upstream 2609063 64369958 ~ 64376356 (+)
G1102115 NA other downstream 239708 67225352 ~ 67225799 (+)
LOC110538103 LOC106600823 other downstream 819705 67793428 ~ 67810071 (+)
G1103416 eif1b other downstream 1002050 67987694 ~ 68048717 (+)
G1104149 LOC106600798 other downstream 1518397 68504041 ~ 68505295 (+)

Expression


Co-expression Network