G1102043



Basic Information


Item Value
gene id G1102043
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 67092997 ~ 67093240 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1253166
ttcttattcatccctttacatttgtgtgtagttgttgtgaattacTTGTTAAattttactgcattgtcggaactagaagcacaagcattaacatctgctaaccatgtgtatgtttcatttttattacctttatttaactaggcaagtcagttaagaacaaattcttattttcaatgacagcctaggaacagtgggttaactgcctgttcaggggcagaacgacagatttgtaccttgtcagctc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1253166 True 244 lncRNA 0.36 1 67092997 67093240

Neighbor


gene id symbol gene type direction distance location
LOC110538082 LOC106600849 coding upstream 65859 67008013 ~ 67027138 (+)
LOC110538077 LOC106600959 coding upstream 414332 66674135 ~ 66678665 (+)
LOC110538072 psd3 coding upstream 422182 66661875 ~ 66670815 (+)
LOC110538075 LOC106600854 coding upstream 439035 66644027 ~ 66653962 (+)
LOC110538073 LOC106600855 coding upstream 459483 66589702 ~ 66633514 (+)
LOC110538084 LOC106600841 coding downstream 55561 67148801 ~ 67164013 (+)
LOC118937895 NA coding downstream 187723 67280963 ~ 67292113 (+)
LOC110538094 NA coding downstream 387822 67481062 ~ 67491128 (+)
LOC110538945 LOC106607489 coding downstream 477984 67571224 ~ 67574023 (+)
LOC110538098 LOC106607492 coding downstream 543884 67637124 ~ 67643446 (+)
G1102026 LOC106600846 non-coding upstream 21355 67064618 ~ 67071642 (+)
G1102024 NA non-coding upstream 29870 67062891 ~ 67063127 (+)
G1102022 NA non-coding upstream 31108 67061662 ~ 67061889 (+)
G1102021 NA non-coding upstream 33681 67058735 ~ 67059407 (+)
G1101998 NA non-coding upstream 76569 67016088 ~ 67016428 (+)
G1102044 NA non-coding downstream 1466 67094706 ~ 67094932 (+)
G1102074 NA non-coding downstream 45392 67138632 ~ 67142806 (+)
G1102098 NA non-coding downstream 98166 67191406 ~ 67191745 (+)
G1102101 NA non-coding downstream 103785 67197025 ~ 67197271 (+)
G1102117 NA non-coding downstream 134507 67227747 ~ 67227946 (+)
G1101805 NA other upstream 321606 66724661 ~ 66822261 (+)
LOC110538063 abi1 other upstream 924800 66148710 ~ 66168256 (+)
G1100432 NA other upstream 1659540 65433140 ~ 65433457 (+)
G1102115 NA other downstream 132112 67225352 ~ 67225799 (+)
LOC110538103 LOC106600823 other downstream 712109 67793428 ~ 67810071 (+)
G1103416 eif1b other downstream 894454 67987694 ~ 68048717 (+)
G1104149 LOC106600798 other downstream 1410801 68504041 ~ 68505295 (+)
G1104162 NA other downstream 1435041 68528281 ~ 68531861 (+)

Expression



Co-expression Network