Gene
RNA
| Item | Value |
|---|---|
| gene id | G1102101 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 67197025 ~ 67197271 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110486979 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1253232 | True | 247 | lncRNA | 0.57 | 1 | 67197025 | 67197271 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538084 | LOC106600841 | coding | upstream | 33012 | 67148801 ~ 67164013 (+) |
| LOC110538082 | LOC106600849 | coding | upstream | 169887 | 67008013 ~ 67027138 (+) |
| LOC110538077 | LOC106600959 | coding | upstream | 518360 | 66674135 ~ 66678665 (+) |
| LOC110538072 | psd3 | coding | upstream | 526210 | 66661875 ~ 66670815 (+) |
| LOC110538075 | LOC106600854 | coding | upstream | 543063 | 66644027 ~ 66653962 (+) |
| LOC118937895 | NA | coding | downstream | 83692 | 67280963 ~ 67292113 (+) |
| LOC110538094 | NA | coding | downstream | 283791 | 67481062 ~ 67491128 (+) |
| LOC110538945 | LOC106607489 | coding | downstream | 373953 | 67571224 ~ 67574023 (+) |
| LOC110538098 | LOC106607492 | coding | downstream | 439853 | 67637124 ~ 67643446 (+) |
| LOC110538099 | ube2z | coding | downstream | 450682 | 67647953 ~ 67672094 (+) |
| G1102098 | NA | non-coding | upstream | 5280 | 67191406 ~ 67191745 (+) |
| G1102074 | NA | non-coding | upstream | 54219 | 67138632 ~ 67142806 (+) |
| G1102044 | NA | non-coding | upstream | 102093 | 67094706 ~ 67094932 (+) |
| G1102043 | NA | non-coding | upstream | 103785 | 67092997 ~ 67093240 (+) |
| G1102026 | LOC106600846 | non-coding | upstream | 125383 | 67064618 ~ 67071642 (+) |
| G1102117 | NA | non-coding | downstream | 30476 | 67227747 ~ 67227946 (+) |
| G1102118 | NA | non-coding | downstream | 36012 | 67233283 ~ 67233683 (+) |
| G1102706 | NA | non-coding | downstream | 58580 | 67255851 ~ 67256069 (+) |
| G1102728 | NA | non-coding | downstream | 72581 | 67269852 ~ 67270130 (+) |
| G1102766 | NA | non-coding | downstream | 103698 | 67300969 ~ 67301177 (+) |
| G1102021 | NA | other | upstream | 137618 | 67058735 ~ 67059407 (+) |
| G1101805 | NA | other | upstream | 425634 | 66724661 ~ 66822261 (+) |
| LOC110538063 | abi1 | other | upstream | 1028828 | 66148710 ~ 66168256 (+) |
| G1100432 | NA | other | upstream | 1763568 | 65433140 ~ 65433457 (+) |
| G1102115 | NA | other | downstream | 28081 | 67225352 ~ 67225799 (+) |
| LOC110538103 | LOC106600823 | other | downstream | 608078 | 67793428 ~ 67810071 (+) |
| G1103416 | eif1b | other | downstream | 790423 | 67987694 ~ 68048717 (+) |
| G1104149 | LOC106600798 | other | downstream | 1306770 | 68504041 ~ 68505295 (+) |
| G1104162 | NA | other | downstream | 1331010 | 68528281 ~ 68531861 (+) |
