G1102117


Basic Information

Item Value
gene id G1102117
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 67227747 ~ 67227946 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1253248
ATTCCaatgttttccagaaatcctgtttgGAGGATTCCGGGTTCCCTGCTTATTCCTTTCTGATTCTtggaatcttccaaccaggatttccagAAAAACCTGGACATTTTGGTAAAGTTTGGGGGAAATGTTTCAACCGTATCCACAGGTAAGCAGTGTAAAGAGAAGAGGGATAATGATGAAAAGCACCAGTCAAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1253248 True 200 lncRNA 0.41 1 67227747 67227946

Neighbor

gene id symbol gene type direction distance location
LOC110538084 LOC106600841 coding upstream 63734 67148801 ~ 67164013 (+)
LOC110538082 LOC106600849 coding upstream 200609 67008013 ~ 67027138 (+)
LOC110538077 LOC106600959 coding upstream 549082 66674135 ~ 66678665 (+)
LOC110538072 psd3 coding upstream 556932 66661875 ~ 66670815 (+)
LOC110538075 LOC106600854 coding upstream 573785 66644027 ~ 66653962 (+)
LOC118937895 NA coding downstream 53017 67280963 ~ 67292113 (+)
LOC110538094 NA coding downstream 253116 67481062 ~ 67491128 (+)
LOC110538945 LOC106607489 coding downstream 343278 67571224 ~ 67574023 (+)
LOC110538098 LOC106607492 coding downstream 409178 67637124 ~ 67643446 (+)
LOC110538099 ube2z coding downstream 420007 67647953 ~ 67672094 (+)
G1102101 NA non-coding upstream 30476 67197025 ~ 67197271 (+)
G1102098 NA non-coding upstream 36002 67191406 ~ 67191745 (+)
G1102074 NA non-coding upstream 84941 67138632 ~ 67142806 (+)
G1102044 NA non-coding upstream 132815 67094706 ~ 67094932 (+)
G1102043 NA non-coding upstream 134507 67092997 ~ 67093240 (+)
G1102118 NA non-coding downstream 5337 67233283 ~ 67233683 (+)
G1102706 NA non-coding downstream 27905 67255851 ~ 67256069 (+)
G1102728 NA non-coding downstream 41906 67269852 ~ 67270130 (+)
G1102766 NA non-coding downstream 73023 67300969 ~ 67301177 (+)
G1102780 NA non-coding downstream 85149 67313095 ~ 67313419 (+)
G1102115 NA other upstream 1948 67225352 ~ 67225799 (+)
G1102021 NA other upstream 168340 67058735 ~ 67059407 (+)
G1101805 NA other upstream 456356 66724661 ~ 66822261 (+)
LOC110538063 abi1 other upstream 1059550 66148710 ~ 66168256 (+)
LOC110538103 LOC106600823 other downstream 577403 67793428 ~ 67810071 (+)
G1103416 eif1b other downstream 759748 67987694 ~ 68048717 (+)
G1104149 LOC106600798 other downstream 1276095 68504041 ~ 68505295 (+)
G1104162 NA other downstream 1300335 68528281 ~ 68531861 (+)
LOC110538155 LOC106600992 other downstream 2087786 69315451 ~ 69321518 (+)

Expression


Co-expression Network