Gene
RNA
| Item | Value |
|---|---|
| gene id | G1103378 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 67873781 ~ 67877996 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: junction plakoglobin-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1254623 | True | 994 | lncRNA | 0.46 | 2 | 67873781 | 67877996 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538105 | LOC106600822 | coding | upstream | 17759 | 67824802 ~ 67856022 (+) |
| LOC110538103 | LOC106600823 | coding | upstream | 63710 | 67793428 ~ 67810071 (+) |
| LOC110538104 | LOC106600824 | coding | upstream | 80692 | 67785697 ~ 67793089 (+) |
| LOC110538101 | LOC106600827 | coding | upstream | 115983 | 67752698 ~ 67757798 (+) |
| LOC110538100 | LOC106600828 | coding | upstream | 125063 | 67688984 ~ 67748718 (+) |
| LOC110538947 | LOC106600778 | coding | downstream | 152689 | 68030685 ~ 68033321 (+) |
| LOC110538109 | LOC106600778 | coding | downstream | 155441 | 68033437 ~ 68037843 (+) |
| LOC110538110 | LOC106600816 | coding | downstream | 172309 | 68050305 ~ 68052859 (+) |
| LOC110538112 | NA | coding | downstream | 179629 | 68057625 ~ 68062260 (+) |
| LOC110538113 | LOC106600815 | coding | downstream | 187996 | 68065992 ~ 68070573 (+) |
| G1103334 | NA | non-coding | upstream | 99222 | 67774351 ~ 67774559 (+) |
| G1103333 | NA | non-coding | upstream | 99924 | 67773499 ~ 67773857 (+) |
| G1103331 | NA | non-coding | upstream | 102006 | 67771566 ~ 67771775 (+) |
| G1103312 | NA | non-coding | upstream | 114629 | 67758917 ~ 67759152 (+) |
| G1103172 | NA | non-coding | upstream | 186485 | 67676583 ~ 67687296 (+) |
| G1103415 | NA | non-coding | downstream | 65056 | 67943052 ~ 67943254 (+) |
| G1103416 | eif1b | non-coding | downstream | 109698 | 67987694 ~ 68048717 (+) |
| G1103752 | NA | non-coding | downstream | 269212 | 68147208 ~ 68147412 (+) |
| G1103762 | NA | non-coding | downstream | 326052 | 68204048 ~ 68210597 (+) |
| G1103800 | NA | non-coding | downstream | 333713 | 68211709 ~ 68212001 (+) |
| G1102115 | NA | other | upstream | 647982 | 67225352 ~ 67225799 (+) |
| G1102021 | NA | other | upstream | 814374 | 67058735 ~ 67059407 (+) |
| G1101805 | NA | other | upstream | 1102390 | 66724661 ~ 66822261 (+) |
| LOC110538072 | psd3 | other | upstream | 1210324 | 66661875 ~ 66670815 (+) |
| G1104149 | LOC106600798 | other | downstream | 626045 | 68504041 ~ 68505295 (+) |
| G1104162 | NA | other | downstream | 650285 | 68528281 ~ 68531861 (+) |
| LOC110538155 | LOC106600992 | other | downstream | 1437736 | 69315451 ~ 69321518 (+) |
| LOC110538173 | LOC106607273 | other | downstream | 1945219 | 69823215 ~ 69875030 (+) |
