Gene
RNA
| Item | Value |
|---|---|
| gene id | G1103819 |
| gene name | LOC106600808 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 68220156 ~ 68222116 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger protein 883-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1255113 | True | 1002 | lncRNA | 0.60 | 2 | 68220156 | 68222116 |
68,218,000
68,218,400
68,218,800
68,219,200
68,219,600
68,220,000
68,220,400
68,220,800
68,221,200
68,221,600
68,222,000
68,222,400
68,222,800
68,223,200
68,223,600
68,224,000
68,224,400
68,224,800
68,225,200
68,225,600
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538117 | stx1b | coding | upstream | 17134 | 68151328 ~ 68203022 (+) |
| prf1.3 | LOC106600810 | coding | upstream | 73359 | 68142537 ~ 68146797 (+) |
| LOC110538111 | LOC106600814 | coding | upstream | 139987 | 68077590 ~ 68080169 (+) |
| LOC110538113 | LOC106600815 | coding | upstream | 149583 | 68065992 ~ 68070573 (+) |
| LOC110538112 | NA | coding | upstream | 157896 | 68057625 ~ 68062260 (+) |
| LOC110538119 | LOC106600809 | coding | downstream | 22539 | 68244655 ~ 68257464 (+) |
| LOC110538121 | LOC106607507 | coding | downstream | 44580 | 68266696 ~ 68273592 (+) |
| LOC110538122 | utp18 | coding | downstream | 52790 | 68274906 ~ 68289864 (+) |
| LOC110538123 | LOC106600806 | coding | downstream | 70686 | 68292802 ~ 68308952 (+) |
| LOC110538125 | LOC106600803 | coding | downstream | 105144 | 68327260 ~ 68355287 (+) |
| G1103800 | NA | non-coding | upstream | 8155 | 68211709 ~ 68212001 (+) |
| G1103762 | NA | non-coding | upstream | 9559 | 68204048 ~ 68210597 (+) |
| G1103752 | NA | non-coding | upstream | 72744 | 68147208 ~ 68147412 (+) |
| G1103416 | eif1b | non-coding | upstream | 171439 | 67987694 ~ 68048717 (+) |
| G1103415 | NA | non-coding | upstream | 276902 | 67943052 ~ 67943254 (+) |
| G1103801 | NA | non-coding | downstream | 14720 | 68236836 ~ 68266542 (+) |
| G1103912 | LOC106607511 | non-coding | downstream | 231226 | 68453342 ~ 68455172 (+) |
| G1104142 | NA | non-coding | downstream | 273008 | 68495124 ~ 68496716 (+) |
| G1104176 | LOC106586404 | non-coding | downstream | 327818 | 68549934 ~ 68550220 (+) |
| G1104180 | NA | non-coding | downstream | 334750 | 68556866 ~ 68557199 (+) |
| LOC110538103 | LOC106600823 | other | upstream | 410093 | 67793428 ~ 67810071 (+) |
| G1102115 | NA | other | upstream | 994357 | 67225352 ~ 67225799 (+) |
| G1102021 | NA | other | upstream | 1160749 | 67058735 ~ 67059407 (+) |
| G1101805 | NA | other | upstream | 1448765 | 66724661 ~ 66822261 (+) |
| G1104149 | LOC106600798 | other | downstream | 281925 | 68504041 ~ 68505295 (+) |
| G1104162 | NA | other | downstream | 306165 | 68528281 ~ 68531861 (+) |
| LOC110538155 | LOC106600992 | other | downstream | 1093616 | 69315451 ~ 69321518 (+) |
| LOC110538173 | LOC106607273 | other | downstream | 1601099 | 69823215 ~ 69875030 (+) |
| G1105194 | NA | other | downstream | 1800592 | 70022708 ~ 70048987 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | G453384 | NA | unknown | CI01000319 | null | 4629001 ~ 4634261 (-) |
