G1103912 (LOC106607511)


Basic Information

Item Value
gene id G1103912
gene name LOC106607511
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 68453342 ~ 68455172 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1255212
GCTCACCTCTCCTGGAAGAGTTTGGAGGGAATGAGTCCAGCACGGAGGTTGCTGTCACCCACCCGTTTGGCCTGCCACCAGGTGGGGTCGTCCTGGGTTACCACCTGCAGGATGTCACCTCGCTTGAAGGGAAGTCCCGCCTCCTGACAGGGCGTGGCCTTGTCATCAGCAGGGATGTAGTCAAACAGGGCCCTCATGTAGACCTGAGagacccccccCTTGCTCTCCTTCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1255212 True 233 lncRNA 0.61 2 68453342 68455172

Neighbor

gene id symbol gene type direction distance location
LOC110538949 LOC106600800 coding upstream 15750 68398669 ~ 68437592 (+)
LOC110538126 LOC106600801 coding upstream 58775 68377001 ~ 68394567 (+)
LOC110538948 LOC106600802 coding upstream 77765 68355917 ~ 68375577 (+)
LOC118937938 NA coding upstream 80915 68372284 ~ 68372427 (+)
LOC118937940 NA coding upstream 81548 68371651 ~ 68371794 (+)
trnaa-ugc-55 NA coding downstream 67260 68522432 ~ 68522508 (+)
LOC110538131 LOC106600796 coding downstream 103728 68558900 ~ 68594615 (+)
trnac-gca-3 NA coding downstream 315929 68771101 ~ 68771172 (+)
LOC110538134 LOC106600795 coding downstream 333188 68788360 ~ 68795371 (+)
LOC110538140 LOC106600790 coding downstream 459125 68914297 ~ 68916390 (+)
G1103801 NA non-coding upstream 186800 68236836 ~ 68266542 (+)
G1103819 LOC106600808 non-coding upstream 231226 68220156 ~ 68222116 (+)
G1103800 NA non-coding upstream 241341 68211709 ~ 68212001 (+)
G1103762 NA non-coding upstream 242745 68204048 ~ 68210597 (+)
G1103752 NA non-coding upstream 305930 68147208 ~ 68147412 (+)
G1104142 NA non-coding downstream 39952 68495124 ~ 68496716 (+)
G1104176 LOC106586404 non-coding downstream 94762 68549934 ~ 68550220 (+)
G1104180 NA non-coding downstream 101694 68556866 ~ 68557199 (+)
G1104191 NA non-coding downstream 122175 68577347 ~ 68578669 (+)
G1104340 NA non-coding downstream 192176 68647348 ~ 68647635 (+)
G1103416 eif1b other upstream 444865 67987694 ~ 68048717 (+)
LOC110538103 LOC106600823 other upstream 643279 67793428 ~ 67810071 (+)
G1102115 NA other upstream 1227543 67225352 ~ 67225799 (+)
G1102021 NA other upstream 1393935 67058735 ~ 67059407 (+)
G1101805 NA other upstream 1681951 66724661 ~ 66822261 (+)
G1104149 LOC106600798 other downstream 48869 68504041 ~ 68505295 (+)
G1104162 NA other downstream 73109 68528281 ~ 68531861 (+)
LOC110538155 LOC106600992 other downstream 860560 69315451 ~ 69321518 (+)
LOC110538173 LOC106607273 other downstream 1368043 69823215 ~ 69875030 (+)
G1105194 NA other downstream 1567536 70022708 ~ 70048987 (+)

Expression


Co-expression Network