G1104176 (LOC106586404)


Basic Information

Item Value
gene id G1104176
gene name LOC106586404
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 68549934 ~ 68550220 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1255517
ACATAGGACTGCAAGATTACCTCAAACCAGTGGCAGAGGACACCTTTTCACACCTCAACAGGAGGAGGCTACTTGCACCATGGTCCGAGCAAACAATGCCATGAGACTCAGGGAAATACAAAGGACCATTATAGAAGACAACGATGTCTTTGAAAACATCCATACGGTTAGCATCTCAACCATCGACAgggtgctgcatagaaaccagatgagtatgaaacagctgtaccgtgtaccattccaaaggaataaggacagagttaaggagctatggtaccagtatgtac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106586404

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1255517 True 287 lncRNA 0.45 1 68549934 68550220

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-55 NA coding upstream 27426 68522432 ~ 68522508 (+)
LOC110538949 LOC106600800 coding upstream 112342 68398669 ~ 68437592 (+)
LOC110538126 LOC106600801 coding upstream 155367 68377001 ~ 68394567 (+)
LOC118937938 NA coding upstream 177507 68372284 ~ 68372427 (+)
LOC118937940 NA coding upstream 178140 68371651 ~ 68371794 (+)
LOC110538131 LOC106600796 coding downstream 8680 68558900 ~ 68594615 (+)
trnac-gca-3 NA coding downstream 220881 68771101 ~ 68771172 (+)
LOC110538134 LOC106600795 coding downstream 238140 68788360 ~ 68795371 (+)
LOC110538140 LOC106600790 coding downstream 364077 68914297 ~ 68916390 (+)
trnac-gca-5 NA coding downstream 550790 69101010 ~ 69101081 (+)
G1104142 NA non-coding upstream 53218 68495124 ~ 68496716 (+)
G1103912 LOC106607511 non-coding upstream 94762 68453342 ~ 68455172 (+)
G1103801 NA non-coding upstream 283392 68236836 ~ 68266542 (+)
G1103819 LOC106600808 non-coding upstream 327818 68220156 ~ 68222116 (+)
G1103800 NA non-coding upstream 337933 68211709 ~ 68212001 (+)
G1104180 NA non-coding downstream 6646 68556866 ~ 68557199 (+)
G1104191 NA non-coding downstream 27127 68577347 ~ 68578669 (+)
G1104340 NA non-coding downstream 97128 68647348 ~ 68647635 (+)
G1104343 NA non-coding downstream 98949 68649169 ~ 68649380 (+)
G1104362 NA non-coding downstream 113513 68663733 ~ 68664064 (+)
G1104162 NA other upstream 18073 68528281 ~ 68531861 (+)
G1104149 LOC106600798 other upstream 44639 68504041 ~ 68505295 (+)
G1103416 eif1b other upstream 541457 67987694 ~ 68048717 (+)
LOC110538103 LOC106600823 other upstream 739871 67793428 ~ 67810071 (+)
G1102115 NA other upstream 1324135 67225352 ~ 67225799 (+)
LOC110538155 LOC106600992 other downstream 765512 69315451 ~ 69321518 (+)
LOC110538173 LOC106607273 other downstream 1272995 69823215 ~ 69875030 (+)
G1105194 NA other downstream 1472488 70022708 ~ 70048987 (+)
G1105281 NA other downstream 1612469 70162689 ~ 70194672 (+)
G1105357 NA other downstream 1774738 70324958 ~ 70327126 (+)

Expression


Co-expression Network