G1106492



Basic Information


Item Value
gene id G1106492
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 69193416 ~ 69193850 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1258087
gaagaacttgactggcctgtacaaagccctgacctcaaccccaatcaaacatctttgggatgaattggaatgccgactccgagccaggcctaatcgcccaacatcagtgcccgacctcactaatgctcttgtggctgaatggaagcaagtccctgcagcaatgttccaacatctaatggaaagacttcccagaagactggaggctgttatagcatcaaaggggggaccaactccatattaatgcccatgattttggagtgagatgttcaacgagtaggtgtccacatacgtttggtcatgtagtgtatgtgatcAGATTTGATCAACAAGAGATAAGTCCTGTCTTTAACTTCCAGGGAAAAGCCCCATTGATTATGAGTAGGGCTCTGTCTTAAAAGCTACCGTTAATCTGGGAAGTTGCCCAGTAGGCTGGAC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1258087 True 435 lncRNA 0.47 1 69193416 69193850
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110538146 LOC106607253 coding downstream 35473 69119512 ~ 69157943 (-)
LOC110538145 LOC106600984 coding downstream 78709 69110459 ~ 69114707 (-)
LOC110538142 LOC106601046 coding downstream 93308 69081658 ~ 69100108 (-)
LOC110538141 LOC106600981 coding downstream 113097 69038972 ~ 69080319 (-)
arhgap23a LOC106600788 coding downstream 175179 68918361 ~ 69018237 (-)
LOC110538149 LOC106607256 coding upstream 27701 69221551 ~ 69258212 (-)
LOC110538952 LOC106600990 coding upstream 67387 69261237 ~ 69279402 (-)
LOC110538152 phop1 coding upstream 88055 69281905 ~ 69285387 (-)
LOC110538153 LOC106607259 coding upstream 95637 69289487 ~ 69309524 (-)
LOC110538154 phb coding upstream 116646 69310496 ~ 69314044 (-)
G1106489 NA non-coding downstream 2009 69190474 ~ 69191407 (-)
G1106488 NA non-coding downstream 3429 69189544 ~ 69189987 (-)
G1106486 NA non-coding downstream 7235 69185940 ~ 69186181 (-)
G1106485 NA non-coding downstream 7931 69185240 ~ 69185485 (-)
G1106473 NA non-coding downstream 21607 69171384 ~ 69171809 (-)
G1106501 NA non-coding upstream 33646 69227496 ~ 69227729 (-)
G1106515 NA non-coding upstream 56216 69250066 ~ 69250425 (-)
G1106517 NA non-coding upstream 60577 69254427 ~ 69254663 (-)
G1106562 NA non-coding upstream 186374 69380224 ~ 69384008 (-)
G1106463 rl19 other downstream 24528 69166461 ~ 69168888 (-)
LOC110538128 LOC106600798 other downstream 689510 68495125 ~ 68517925 (-)
LOC110538106 wipf2 other downstream 1327774 67860396 ~ 67867954 (-)
G1103529 NA other downstream 1337408 67853833 ~ 67856008 (-)
LOC110538092 hoxb6aa other downstream 1704674 67486521 ~ 67489383 (-)
G1106634 NA other upstream 302790 69496640 ~ 69496962 (-)
G1107004 NA other upstream 1043244 70237094 ~ 70237601 (-)
LOC110538202 LOC106601032 other upstream 1566065 70752569 ~ 70775014 (-)
G1107481 NA other upstream 1950805 71144655 ~ 71147165 (-)
G1107536 NA other upstream 2118409 71312259 ~ 71313001 (-)

Expression


G1106492 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
End of interactive chart.

G1106492 Expression in each Bioproject

Bar chart with 20 bars.
G1106492 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network