G1104775


Basic Information

Item Value
gene id G1104775
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 69314759 ~ 69315064 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1256199
GTTAGGTAGCCATtgtcgccatgacatcgcctacaagtgtcatcggggatttctattggagaagcatcTCTTTGGCGAGAATAATGTCTAGGCAGATGTTTGACTGTTTCTTCTTAATTTTTCAACTTTTGAGAGGTTAGTGAGACATATTGTGAAAATAAAGTTGAACTTACTGTTGAACTTACTTCAGTGGctggcttcacacacacacacacacacacacacacacacacacacacacacacacaagatttggcatgggtccccagatcctcaaaaagttctacagctgcaccactgagagca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1256199 True 306 lncRNA 0.43 1 69314759 69315064

Neighbor

gene id symbol gene type direction distance location
LOC110538150 LOC106600987 coding upstream 85559 69197666 ~ 69229200 (+)
LOC110538148 NA coding upstream 138790 69171519 ~ 69175969 (+)
LOC110538147 LOC107084780 coding upstream 145871 69166428 ~ 69168888 (+)
trnac-gca-6 NA coding upstream 205616 69109072 ~ 69109143 (+)
trnac-gca-5 NA coding upstream 213678 69101010 ~ 69101081 (+)
LOC110538155 LOC106600992 coding downstream 387 69315451 ~ 69321518 (+)
LOC110538157 LOC106600994 coding downstream 87929 69402993 ~ 69435277 (+)
LOC110538162 LOC106600999 coding downstream 295735 69610799 ~ 69612255 (+)
LOC110486238 LOC106607270 coding downstream 415193 69730257 ~ 69735305 (+)
LOC110538170 LOC106601006 coding downstream 484610 69799674 ~ 69819817 (+)
G1104732 phb non-coding upstream 395 69310503 ~ 69314364 (+)
G1104770 NA non-coding upstream 17190 69297239 ~ 69297569 (+)
G1104768 NA non-coding upstream 24527 69288974 ~ 69290232 (+)
G1104767 NA non-coding upstream 27875 69286539 ~ 69286884 (+)
G1104757 NA non-coding upstream 56713 69257809 ~ 69258046 (+)
G1104776 NA non-coding downstream 29 69315093 ~ 69315293 (+)
G1104733 LOC106600993 non-coding downstream 6598 69321662 ~ 69334729 (+)
G1104781 NA non-coding downstream 36977 69352041 ~ 69437721 (+)
G1104821 NA non-coding downstream 90074 69405138 ~ 69405394 (+)
G1104828 NA non-coding downstream 96178 69411242 ~ 69452170 (+)
G1104162 NA other upstream 782898 68528281 ~ 68531861 (+)
G1104149 LOC106600798 other upstream 809464 68504041 ~ 68505295 (+)
G1103416 eif1b other upstream 1306282 67987694 ~ 68048717 (+)
LOC110538103 LOC106600823 other upstream 1504696 67793428 ~ 67810071 (+)
G1102115 NA other upstream 2088960 67225352 ~ 67225799 (+)
LOC110538173 LOC106607273 other downstream 508151 69823215 ~ 69875030 (+)
G1105194 NA other downstream 707644 70022708 ~ 70048987 (+)
G1105281 NA other downstream 847625 70162689 ~ 70194672 (+)
G1105357 NA other downstream 1009894 70324958 ~ 70327126 (+)

Expression


Co-expression Network