G1104828


Basic Information

Item Value
gene id G1104828
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 69411242 ~ 69452170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1256265
agacagacaaagagagagagagacagggagagataactagaaagagagacagggagagataagtagagagagagagacagggagagataacaagagagagagacagggagagataactagagagagagagagagacaaggagagataactagagagggagagataactagagagagagagagacatggagagatgactagagagagagagacagggagagataactagaaagagagagacagggagagataactagagagagagagacagggagagataactagagagagagacagggagagataagtagagagagagagacagggagagataactagagagagagacagggagagataagtagagagagagagacagggatagataactagagagagagacagggagagataactagagagagagagacagggagagataactagagagagagagagagagacaaggagagataactagagagagagaccgggagagataactagagagagagacagggagagataactagagagagagagagacagggagagataactagagagagagagacagggagggataactagagagagagacagggagagataactagagagagagagacagggagagataactagagagagagagacaaggagagataactagagagagagagacagggagagataactagagagatagagacagggagagataactagagagagagagacggggagggataactagagagaaagagagacagggagagataactagagagagagagacagggagagataactagagagagagagacagggagagataactagagagagagagacaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1256265 True 858 lncRNA 0.46 4 69411242 69452170

Neighbor

gene id symbol gene type direction distance location
LOC110538155 LOC106600992 coding upstream 89724 69315451 ~ 69321518 (+)
LOC110538150 LOC106600987 coding upstream 182042 69197666 ~ 69229200 (+)
LOC110538148 NA coding upstream 235273 69171519 ~ 69175969 (+)
LOC110538147 LOC107084780 coding upstream 242354 69166428 ~ 69168888 (+)
trnac-gca-6 NA coding upstream 302099 69109072 ~ 69109143 (+)
LOC110538162 LOC106600999 coding downstream 158629 69610799 ~ 69612255 (+)
LOC110486238 LOC106607270 coding downstream 278087 69730257 ~ 69735305 (+)
LOC110538170 LOC106601006 coding downstream 347504 69799674 ~ 69819817 (+)
LOC110538173 LOC106607273 coding downstream 402610 69823215 ~ 69875030 (+)
LOC110538175 LOC106601009 coding downstream 455251 69907421 ~ 69935378 (+)
G1104821 NA non-coding upstream 5848 69405138 ~ 69405394 (+)
G1104733 LOC106600993 non-coding upstream 76513 69321662 ~ 69334729 (+)
G1104776 NA non-coding upstream 95949 69315093 ~ 69315293 (+)
G1104775 NA non-coding upstream 96178 69314759 ~ 69315064 (+)
G1104732 phb non-coding upstream 96878 69310503 ~ 69314364 (+)
G1104877 NA non-coding downstream 7177 69459347 ~ 69459604 (+)
G1104885 NA non-coding downstream 17553 69469723 ~ 69469943 (+)
G1104893 NA non-coding downstream 24716 69476886 ~ 69477085 (+)
G1104898 NA non-coding downstream 35607 69487777 ~ 69488061 (+)
G1104907 NA non-coding downstream 44179 69496349 ~ 69496558 (+)
G1104162 NA other upstream 879381 68528281 ~ 68531861 (+)
G1104149 LOC106600798 other upstream 905947 68504041 ~ 68505295 (+)
G1103416 eif1b other upstream 1402765 67987694 ~ 68048717 (+)
LOC110538103 LOC106600823 other upstream 1601179 67793428 ~ 67810071 (+)
G1105194 NA other downstream 570538 70022708 ~ 70048987 (+)
G1105281 NA other downstream 710519 70162689 ~ 70194672 (+)
G1105357 NA other downstream 872788 70324958 ~ 70327126 (+)
G1105393 NA other downstream 918585 70370755 ~ 70371211 (+)

Expression


Co-expression Network