Gene
RNA
| Item | Value |
|---|---|
| gene id | G1104843 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 69685230 ~ 69718282 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1256282 | False | 594 | lncRNA | 0.45 | 2 | 69685230 | 69718282 |
| TU1256283 | True | 350 | lncRNA | 0.42 | 2 | 69685230 | 69688169 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538162 | LOC106600999 | coding | upstream | 72975 | 69610799 ~ 69612255 (+) |
| LOC110538157 | LOC106600994 | coding | upstream | 249953 | 69402993 ~ 69435277 (+) |
| LOC110538155 | LOC106600992 | coding | upstream | 363712 | 69315451 ~ 69321518 (+) |
| LOC110538150 | LOC106600987 | coding | upstream | 456030 | 69197666 ~ 69229200 (+) |
| LOC110538148 | NA | coding | upstream | 509261 | 69171519 ~ 69175969 (+) |
| LOC110486238 | LOC106607270 | coding | downstream | 11975 | 69730257 ~ 69735305 (+) |
| LOC110538170 | LOC106601006 | coding | downstream | 81392 | 69799674 ~ 69819817 (+) |
| LOC110538173 | LOC106607273 | coding | downstream | 136498 | 69823215 ~ 69875030 (+) |
| LOC110538175 | LOC106601009 | coding | downstream | 189139 | 69907421 ~ 69935378 (+) |
| LOC110538177 | LOC106607277 | coding | downstream | 234140 | 69952422 ~ 69957520 (+) |
| G1104956 | NA | non-coding | upstream | 57676 | 69624991 ~ 69627554 (+) |
| G1104909 | LOC106600998 | non-coding | upstream | 92817 | 69588532 ~ 69592413 (+) |
| G1104907 | NA | non-coding | upstream | 188672 | 69496349 ~ 69496558 (+) |
| G1104898 | NA | non-coding | upstream | 197169 | 69487777 ~ 69488061 (+) |
| G1104893 | NA | non-coding | upstream | 208145 | 69476886 ~ 69477085 (+) |
| G1104856 | cdk12 | non-coding | downstream | 69012 | 69787294 ~ 69788417 (+) |
| G1105120 | NA | non-coding | downstream | 152736 | 69871018 ~ 69871310 (+) |
| G1104842 | NA | non-coding | downstream | 157971 | 69876253 ~ 69878388 (+) |
| G1105129 | NA | non-coding | downstream | 172936 | 69891218 ~ 69936515 (+) |
| G1104162 | NA | other | upstream | 1153369 | 68528281 ~ 68531861 (+) |
| G1104149 | LOC106600798 | other | upstream | 1179935 | 68504041 ~ 68505295 (+) |
| G1103416 | eif1b | other | upstream | 1676753 | 67987694 ~ 68048717 (+) |
| LOC110538103 | LOC106600823 | other | upstream | 1875167 | 67793428 ~ 67810071 (+) |
| G1105194 | NA | other | downstream | 304426 | 70022708 ~ 70048987 (+) |
| G1105281 | NA | other | downstream | 444407 | 70162689 ~ 70194672 (+) |
| G1105357 | NA | other | downstream | 606676 | 70324958 ~ 70327126 (+) |
| G1105393 | NA | other | downstream | 652473 | 70370755 ~ 70371211 (+) |
