G1105148


Basic Information

Item Value
gene id G1105148
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 69916673 ~ 69917046 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1256603
gtactgtagacGTACTGCTGACATActgttgacatactgtagacgtactgtagacgtactgttgacgtactgtagacgtactgtagacatactgttgacgtactgtagacgtactgtagacgtactgtagacatactgtagacgtactgtagacatactgttgacatactgtagacgtactgtagacatactgtagacgtactgtagacgtactgttgacatactgtagac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106527262

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1256603 True 231 lncRNA 0.42 2 69916673 69917046

Neighbor

gene id symbol gene type direction distance location
LOC110538173 LOC106607273 coding upstream 41643 69823215 ~ 69875030 (+)
LOC110538170 LOC106601006 coding upstream 96856 69799674 ~ 69819817 (+)
LOC110486238 LOC106607270 coding upstream 181368 69730257 ~ 69735305 (+)
LOC110538162 LOC106600999 coding upstream 304418 69610799 ~ 69612255 (+)
LOC110538157 LOC106600994 coding upstream 481396 69402993 ~ 69435277 (+)
LOC110538177 LOC106607277 coding downstream 35376 69952422 ~ 69957520 (+)
LOC110539166 LOC106601013 coding downstream 48460 69965506 ~ 69967488 (+)
LOC110538185 kbrs2 coding downstream 127539 70044585 ~ 70048245 (+)
LOC118937908 NA coding downstream 465123 70382169 ~ 70382221 (+)
LOC110538197 LOC106601026 coding downstream 723918 70640964 ~ 70664813 (+)
G1104842 NA non-coding upstream 38285 69876253 ~ 69878388 (+)
G1105120 NA non-coding upstream 45363 69871018 ~ 69871310 (+)
G1104856 cdk12 non-coding upstream 128256 69787294 ~ 69788417 (+)
G1104859 NA non-coding upstream 226450 69689362 ~ 69690223 (+)
G1104841 NA non-coding downstream 19852 69936898 ~ 69937341 (+)
G1105173 NA non-coding downstream 58544 69975590 ~ 69976435 (+)
G1105198 LOC106607285 non-coding downstream 120362 70037408 ~ 70041331 (+)
G1105197 NA non-coding downstream 138994 70056040 ~ 70058980 (+)
G1105291 NA non-coding downstream 266255 70183301 ~ 70183868 (+)
LOC110538155 LOC106600992 other upstream 599025 69315451 ~ 69321518 (+)
G1104162 NA other upstream 1384812 68528281 ~ 68531861 (+)
G1104149 LOC106600798 other upstream 1411378 68504041 ~ 68505295 (+)
G1103416 eif1b other upstream 1908196 67987694 ~ 68048717 (+)
G1105194 NA other downstream 105662 70022708 ~ 70048987 (+)
G1105281 NA other downstream 245643 70162689 ~ 70194672 (+)
G1105357 NA other downstream 407912 70324958 ~ 70327126 (+)
G1105393 NA other downstream 453709 70370755 ~ 70371211 (+)
G1105467 LOC106601028 other downstream 695257 70612303 ~ 70633971 (+)

Expression


Co-expression Network