G1105317


Basic Information

Item Value
gene id G1105317
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70239742 ~ 70239956 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1256781
GTGCCACACTAAAAGCATGCTAACGGTCATGCCGGTTGCAGCGCCGCGCACTAGGCTATATCTAGCTGCTAAACGCTGGCCTCGCCACTGCTTCTTTAAATGCGGGTGACATTTACATGAAGTGCTTCATTTGTGCCAAGGACAGAAGTGTGGTGTGTTAACAATTAAAAGGGTGCTTAATGGGGCATGCAAATGCTATTTTGAGAGCATGTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1256781 True 215 lncRNA 0.47 1 70239742 70239956

Neighbor

gene id symbol gene type direction distance location
LOC110538185 kbrs2 coding upstream 191497 70044585 ~ 70048245 (+)
LOC110539166 LOC106601013 coding upstream 272254 69965506 ~ 69967488 (+)
LOC110538177 LOC106607277 coding upstream 282222 69952422 ~ 69957520 (+)
LOC110538175 LOC106601009 coding upstream 304364 69907421 ~ 69935378 (+)
LOC110538173 LOC106607273 coding upstream 364712 69823215 ~ 69875030 (+)
LOC118937908 NA coding downstream 142213 70382169 ~ 70382221 (+)
LOC110538197 LOC106601026 coding downstream 401008 70640964 ~ 70664813 (+)
LOC110538199 LOC106607392 coding downstream 494283 70734239 ~ 70736353 (+)
si:ch73-141c7.1 LOC106601031 coding downstream 505579 70745535 ~ 70750237 (+)
LOC110538201 LOC106601034 coding downstream 512558 70752514 ~ 70754545 (+)
G1105304 NA non-coding upstream 26113 70213287 ~ 70213629 (+)
G1105291 NA non-coding upstream 55874 70183301 ~ 70183868 (+)
G1105197 NA non-coding upstream 180762 70056040 ~ 70058980 (+)
G1105198 LOC106607285 non-coding upstream 198411 70037408 ~ 70041331 (+)
G1105173 NA non-coding upstream 263307 69975590 ~ 69976435 (+)
G1105322 NA non-coding downstream 15128 70255084 ~ 70255358 (+)
G1105326 NA non-coding downstream 23704 70263660 ~ 70263902 (+)
G1105327 NA non-coding downstream 24701 70264657 ~ 70264894 (+)
G1105330 NA non-coding downstream 28435 70268391 ~ 70268627 (+)
G1105342 NA non-coding downstream 55163 70295119 ~ 70296099 (+)
G1105281 NA other upstream 45070 70162689 ~ 70194672 (+)
G1105194 NA other upstream 190755 70022708 ~ 70048987 (+)
LOC110538155 LOC106600992 other upstream 922094 69315451 ~ 69321518 (+)
G1104162 NA other upstream 1707881 68528281 ~ 68531861 (+)
G1105357 NA other downstream 85002 70324958 ~ 70327126 (+)
G1105393 NA other downstream 130799 70370755 ~ 70371211 (+)
G1105467 LOC106601028 other downstream 372347 70612303 ~ 70633971 (+)
G1105655 NA other downstream 662949 70902905 ~ 70906429 (+)
psmg3 psmg3 other downstream 1701595 71941515 ~ 71942804 (+)

Expression


Co-expression Network