G1105330


Basic Information

Item Value
gene id G1105330
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70268391 ~ 70268627 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1256794
ggtaaagccccgccttatctcagctcactggtcaccatagcaacacccacccatagcacgcgctccagcaagtacattgcactggtcatccccaaagccaacacttcctttggccgcctttccgtccagttctctgctgccaatgactggaacaaattgcaaaaatctctgaagctggaatcttacatctccctctctaacttgaagcatcagctgtctgagcagcttaccaatcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1256794 True 237 lncRNA 0.51 1 70268391 70268627

Neighbor

gene id symbol gene type direction distance location
LOC110538185 kbrs2 coding upstream 220146 70044585 ~ 70048245 (+)
LOC110539166 LOC106601013 coding upstream 300903 69965506 ~ 69967488 (+)
LOC110538177 LOC106607277 coding upstream 310871 69952422 ~ 69957520 (+)
LOC110538175 LOC106601009 coding upstream 333013 69907421 ~ 69935378 (+)
LOC110538173 LOC106607273 coding upstream 393361 69823215 ~ 69875030 (+)
LOC118937908 NA coding downstream 113542 70382169 ~ 70382221 (+)
LOC110538197 LOC106601026 coding downstream 372337 70640964 ~ 70664813 (+)
LOC110538199 LOC106607392 coding downstream 465612 70734239 ~ 70736353 (+)
si:ch73-141c7.1 LOC106601031 coding downstream 476908 70745535 ~ 70750237 (+)
LOC110538201 LOC106601034 coding downstream 483887 70752514 ~ 70754545 (+)
G1105327 NA non-coding upstream 3497 70264657 ~ 70264894 (+)
G1105326 NA non-coding upstream 4489 70263660 ~ 70263902 (+)
G1105322 NA non-coding upstream 13033 70255084 ~ 70255358 (+)
G1105317 NA non-coding upstream 28435 70239742 ~ 70239956 (+)
G1105304 NA non-coding upstream 54762 70213287 ~ 70213629 (+)
G1105342 NA non-coding downstream 26492 70295119 ~ 70296099 (+)
G1105343 NA non-coding downstream 28191 70296818 ~ 70297208 (+)
G1105353 NA non-coding downstream 46817 70315444 ~ 70315738 (+)
G1105354 NA non-coding downstream 47207 70315834 ~ 70316132 (+)
G1105355 NA non-coding downstream 48500 70317127 ~ 70317330 (+)
G1105281 NA other upstream 73719 70162689 ~ 70194672 (+)
G1105194 NA other upstream 219404 70022708 ~ 70048987 (+)
LOC110538155 LOC106600992 other upstream 950743 69315451 ~ 69321518 (+)
G1104162 NA other upstream 1736530 68528281 ~ 68531861 (+)
G1105357 NA other downstream 56331 70324958 ~ 70327126 (+)
G1105393 NA other downstream 102128 70370755 ~ 70371211 (+)
G1105467 LOC106601028 other downstream 343676 70612303 ~ 70633971 (+)
G1105655 NA other downstream 634278 70902905 ~ 70906429 (+)
psmg3 psmg3 other downstream 1672924 71941515 ~ 71942804 (+)

Expression


Co-expression Network