G1105342


Basic Information

Item Value
gene id G1105342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70295119 ~ 70296099 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1256808
ACTGTGAGGTGATAGTAATACATGCATTTTACTGCACTGTGAGGTGATAGTAATAcatgcatttcactgcactgtgagGTGATAGTAATACATGCATTTTACTGCACTGTGAGGTGATAGTAATACATGCATTTTACTGCACTGTGAGGTGATAGTAATAcatgcatttcactgcactgtgagGTGATAGTAATAcACGCATTTTACTGCACTGTGAAGTGCTAGTAATACACGCATTTTACTGCACTGTGAAGTGCTAGTAATACACGCATTTTACTGCACTGTGAGGTGATAGTAATACATGCATTTTACTGCACTGTGAGGTGATAGTAATACATGCATTTCACTGCACTATGAGGTGATAGTAATACATGCATTTTACTGCACTGTGAGGTGATAGTAATACATGCATTTTACTGCACTGTGAGGTGATAGTAATACATGCATTTTACTGCACTGTGAAGTGATAGTAATAcatgcatttcactgcactgtgagGTGATAGTAATACATGCATTTTACTGCACTGTGAAGTGCTAGTAATACATGCATTTTACTGCACTGTGAAGTGATAGTAATACATGCATTTTACTGCACTGTGAGGTGATAGTAATACATGCATTTTACTGCACTGTGAAGTGATAGTAATAcatgcatttcactgcactgtgaaGTGATAGTAATAAATGCATTTTACTCCACTGTGAGGTGATAGTAATACATGCATTTTACTGCACTGTGAAGTGATAGTAATACATGCATTTTACTGCACTGTGAGGTGATCGTAATACATGCATTTTACTGCA

Function

NR:

description
PREDICTED: suppressor of tumorigenicity 14 protein isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1256808 True 806 lncRNA 0.37 3 70295119 70296099

Neighbor

gene id symbol gene type direction distance location
LOC110538185 kbrs2 coding upstream 246874 70044585 ~ 70048245 (+)
LOC110539166 LOC106601013 coding upstream 327631 69965506 ~ 69967488 (+)
LOC110538177 LOC106607277 coding upstream 337599 69952422 ~ 69957520 (+)
LOC110538175 LOC106601009 coding upstream 359741 69907421 ~ 69935378 (+)
LOC110538173 LOC106607273 coding upstream 420089 69823215 ~ 69875030 (+)
LOC118937908 NA coding downstream 86070 70382169 ~ 70382221 (+)
LOC110538197 LOC106601026 coding downstream 344865 70640964 ~ 70664813 (+)
LOC110538199 LOC106607392 coding downstream 438140 70734239 ~ 70736353 (+)
si:ch73-141c7.1 LOC106601031 coding downstream 449436 70745535 ~ 70750237 (+)
LOC110538201 LOC106601034 coding downstream 456415 70752514 ~ 70754545 (+)
G1105330 NA non-coding upstream 26492 70268391 ~ 70268627 (+)
G1105327 NA non-coding upstream 30225 70264657 ~ 70264894 (+)
G1105326 NA non-coding upstream 31217 70263660 ~ 70263902 (+)
G1105322 NA non-coding upstream 39761 70255084 ~ 70255358 (+)
G1105317 NA non-coding upstream 55163 70239742 ~ 70239956 (+)
G1105343 NA non-coding downstream 719 70296818 ~ 70297208 (+)
G1105353 NA non-coding downstream 19345 70315444 ~ 70315738 (+)
G1105354 NA non-coding downstream 19735 70315834 ~ 70316132 (+)
G1105355 NA non-coding downstream 21028 70317127 ~ 70317330 (+)
G1105358 kat2a non-coding downstream 21595 70317694 ~ 70317928 (+)
G1105281 NA other upstream 100447 70162689 ~ 70194672 (+)
G1105194 NA other upstream 246132 70022708 ~ 70048987 (+)
LOC110538155 LOC106600992 other upstream 977471 69315451 ~ 69321518 (+)
G1104162 NA other upstream 1763258 68528281 ~ 68531861 (+)
G1105357 NA other downstream 28859 70324958 ~ 70327126 (+)
G1105393 NA other downstream 74656 70370755 ~ 70371211 (+)
G1105467 LOC106601028 other downstream 316204 70612303 ~ 70633971 (+)
G1105655 NA other downstream 606806 70902905 ~ 70906429 (+)
psmg3 psmg3 other downstream 1645452 71941515 ~ 71942804 (+)

Expression


Co-expression Network