G1105354



Basic Information


Item Value
gene id G1105354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70315834 ~ 70316132 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1256820
tgcaaggactgaccatccatgatattgaAATGATAGTTTTACCAATGTTTTTAGGCTATAGTGTTTCTTTACATTTCCATTGTTTCaactcatacaagtacttgggagtatggctagacaatacactgtccttctctcagcacatatcaaatctGCAGGATGAAGTTCTAGACTtagtttcctctatcgtaatcgctcctctttcactacagctgccaaactaacccttcGGTGTACCATCCTAACCAAGCAAAATTACGGAGAtgtcatttatagatcggcaggtaagggtgctctcg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1256820 True 299 lncRNA 0.40 1 70315834 70316132

Neighbor


gene id symbol gene type direction distance location
LOC110538185 kbrs2 coding upstream 267589 70044585 ~ 70048245 (+)
LOC110539166 LOC106601013 coding upstream 348346 69965506 ~ 69967488 (+)
LOC110538177 LOC106607277 coding upstream 358314 69952422 ~ 69957520 (+)
LOC110538175 LOC106601009 coding upstream 380456 69907421 ~ 69935378 (+)
LOC110538173 LOC106607273 coding upstream 440804 69823215 ~ 69875030 (+)
LOC118937908 NA coding downstream 66037 70382169 ~ 70382221 (+)
LOC110538197 LOC106601026 coding downstream 324832 70640964 ~ 70664813 (+)
LOC110538199 LOC106607392 coding downstream 418107 70734239 ~ 70736353 (+)
si:ch73-141c7.1 LOC106601031 coding downstream 429403 70745535 ~ 70750237 (+)
LOC110538201 LOC106601034 coding downstream 436382 70752514 ~ 70754545 (+)
G1105353 NA non-coding upstream 96 70315444 ~ 70315738 (+)
G1105343 NA non-coding upstream 18626 70296818 ~ 70297208 (+)
G1105342 NA non-coding upstream 19735 70295119 ~ 70296099 (+)
G1105330 NA non-coding upstream 47207 70268391 ~ 70268627 (+)
G1105327 NA non-coding upstream 50940 70264657 ~ 70264894 (+)
G1105355 NA non-coding downstream 995 70317127 ~ 70317330 (+)
G1105358 kat2a non-coding downstream 1562 70317694 ~ 70317928 (+)
G1105356 NA non-coding downstream 2578 70318710 ~ 70324432 (+)
G1105371 kcnh4 non-coding downstream 27354 70343486 ~ 70343770 (+)
G1105372 NA non-coding downstream 28271 70344403 ~ 70344709 (+)
G1105281 NA other upstream 121162 70162689 ~ 70194672 (+)
G1105194 NA other upstream 266847 70022708 ~ 70048987 (+)
LOC110538155 LOC106600992 other upstream 998186 69315451 ~ 69321518 (+)
G1104162 NA other upstream 1783973 68528281 ~ 68531861 (+)
G1105357 NA other downstream 8826 70324958 ~ 70327126 (+)
G1105393 NA other downstream 54623 70370755 ~ 70371211 (+)
G1105467 LOC106601028 other downstream 296171 70612303 ~ 70633971 (+)
G1105655 NA other downstream 586773 70902905 ~ 70906429 (+)
psmg3 psmg3 other downstream 1625419 71941515 ~ 71942804 (+)

Expression



Co-expression Network