Gene
RNA
| Item | Value |
|---|---|
| gene id | G1105358 |
| gene name | kat2a |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 70317694 ~ 70317928 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| kat2a | Predicted to enable N-acyltransferase activity; chromatin binding activity; and transcription coactivator activity. Involved in histone acetylation; regulation of bone development; and regulation of cartilage development. Acts upstream of or within bone morphogenesis; heart development; and limb development. Predicted to be located in centrosome and nucleus. Predicted to be part of histone acetyltransferase complex. Is expressed in brain; fin; head; heart; and otic vesicle. Orthologous to human KAT2A (lysine acetyltransferase 2A). |
| description |
|---|
| histone acetyltransferase KAT2A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1256827 | True | 235 | lncRNA | 0.57 | 1 | 70317694 | 70317928 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538185 | kbrs2 | coding | upstream | 269449 | 70044585 ~ 70048245 (+) |
| LOC110539166 | LOC106601013 | coding | upstream | 350206 | 69965506 ~ 69967488 (+) |
| LOC110538177 | LOC106607277 | coding | upstream | 360174 | 69952422 ~ 69957520 (+) |
| LOC110538175 | LOC106601009 | coding | upstream | 382316 | 69907421 ~ 69935378 (+) |
| LOC110538173 | LOC106607273 | coding | upstream | 442664 | 69823215 ~ 69875030 (+) |
| LOC118937908 | NA | coding | downstream | 64241 | 70382169 ~ 70382221 (+) |
| LOC110538197 | LOC106601026 | coding | downstream | 323036 | 70640964 ~ 70664813 (+) |
| LOC110538199 | LOC106607392 | coding | downstream | 416311 | 70734239 ~ 70736353 (+) |
| si:ch73-141c7.1 | LOC106601031 | coding | downstream | 427607 | 70745535 ~ 70750237 (+) |
| LOC110538201 | LOC106601034 | coding | downstream | 434586 | 70752514 ~ 70754545 (+) |
| G1105355 | NA | non-coding | upstream | 364 | 70317127 ~ 70317330 (+) |
| G1105354 | NA | non-coding | upstream | 1562 | 70315834 ~ 70316132 (+) |
| G1105353 | NA | non-coding | upstream | 1956 | 70315444 ~ 70315738 (+) |
| G1105343 | NA | non-coding | upstream | 20486 | 70296818 ~ 70297208 (+) |
| G1105342 | NA | non-coding | upstream | 21595 | 70295119 ~ 70296099 (+) |
| G1105356 | NA | non-coding | downstream | 782 | 70318710 ~ 70324432 (+) |
| G1105371 | kcnh4 | non-coding | downstream | 25558 | 70343486 ~ 70343770 (+) |
| G1105372 | NA | non-coding | downstream | 26475 | 70344403 ~ 70344709 (+) |
| G1105373 | LOC106601023 | non-coding | downstream | 27548 | 70345476 ~ 70345721 (+) |
| G1105374 | NA | non-coding | downstream | 29960 | 70347888 ~ 70348224 (+) |
| G1105281 | NA | other | upstream | 123022 | 70162689 ~ 70194672 (+) |
| G1105194 | NA | other | upstream | 268707 | 70022708 ~ 70048987 (+) |
| LOC110538155 | LOC106600992 | other | upstream | 1000046 | 69315451 ~ 69321518 (+) |
| G1104162 | NA | other | upstream | 1785833 | 68528281 ~ 68531861 (+) |
| G1105357 | NA | other | downstream | 7030 | 70324958 ~ 70327126 (+) |
| G1105393 | NA | other | downstream | 52827 | 70370755 ~ 70371211 (+) |
| G1105467 | LOC106601028 | other | downstream | 294375 | 70612303 ~ 70633971 (+) |
| G1105655 | NA | other | downstream | 584977 | 70902905 ~ 70906429 (+) |
| psmg3 | psmg3 | other | downstream | 1623623 | 71941515 ~ 71942804 (+) |
