G1105356


Basic Information

Item Value
gene id G1105356
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70318710 ~ 70324432 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1256823
TTCCCCCTTATTTATTGGTAAAATTACAATTTGTTGTTTTGCTTGGTTTACCCCTGTCCCCCCATCTCACAGCAGTGACAGCTGCAGGTACTGTTGTGCTAGTCATTGATGTCATAACAGACACGGACTGGTTAGAGGAATCCATCCCCGATAGGAAAAGGttaaagaacagaacagaaaagcAAAAGAAACTGAAGAGAACATCTGAAACCACAAGAGGTGACAGAACCAGTGCACCCAATACCAGAGACTCTTCAGAAAACAAAAGAATTGtacacaaaaacaaaaaaaatacatCTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1256823 True 302 lncRNA 0.40 2 70318710 70324432

Neighbor

gene id symbol gene type direction distance location
LOC110538185 kbrs2 coding upstream 270465 70044585 ~ 70048245 (+)
LOC110539166 LOC106601013 coding upstream 351222 69965506 ~ 69967488 (+)
LOC110538177 LOC106607277 coding upstream 361190 69952422 ~ 69957520 (+)
LOC110538175 LOC106601009 coding upstream 383332 69907421 ~ 69935378 (+)
LOC110538173 LOC106607273 coding upstream 443680 69823215 ~ 69875030 (+)
LOC118937908 NA coding downstream 57737 70382169 ~ 70382221 (+)
LOC110538197 LOC106601026 coding downstream 316532 70640964 ~ 70664813 (+)
LOC110538199 LOC106607392 coding downstream 409807 70734239 ~ 70736353 (+)
si:ch73-141c7.1 LOC106601031 coding downstream 421103 70745535 ~ 70750237 (+)
LOC110538201 LOC106601034 coding downstream 428082 70752514 ~ 70754545 (+)
G1105358 kat2a non-coding upstream 782 70317694 ~ 70317928 (+)
G1105355 NA non-coding upstream 1380 70317127 ~ 70317330 (+)
G1105354 NA non-coding upstream 2578 70315834 ~ 70316132 (+)
G1105353 NA non-coding upstream 2972 70315444 ~ 70315738 (+)
G1105343 NA non-coding upstream 21502 70296818 ~ 70297208 (+)
G1105371 kcnh4 non-coding downstream 19054 70343486 ~ 70343770 (+)
G1105372 NA non-coding downstream 19971 70344403 ~ 70344709 (+)
G1105373 LOC106601023 non-coding downstream 21044 70345476 ~ 70345721 (+)
G1105374 NA non-coding downstream 23456 70347888 ~ 70348224 (+)
G1105442 NA non-coding downstream 136811 70461243 ~ 70461603 (+)
G1105281 NA other upstream 124038 70162689 ~ 70194672 (+)
G1105194 NA other upstream 269723 70022708 ~ 70048987 (+)
LOC110538155 LOC106600992 other upstream 1001062 69315451 ~ 69321518 (+)
G1104162 NA other upstream 1786849 68528281 ~ 68531861 (+)
G1105357 NA other downstream 526 70324958 ~ 70327126 (+)
G1105393 NA other downstream 46323 70370755 ~ 70371211 (+)
G1105467 LOC106601028 other downstream 287871 70612303 ~ 70633971 (+)
G1105655 NA other downstream 578473 70902905 ~ 70906429 (+)
psmg3 psmg3 other downstream 1617119 71941515 ~ 71942804 (+)

Expression


Co-expression Network