G1105373 (LOC106601023)


Basic Information

Item Value
gene id G1105373
gene name LOC106601023
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70345476 ~ 70345721 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1256842
GGATAGCAAGGACCATGCTGCCCTTCAGCACCTCTAGAGACCCAGAGCAGACAAAGTAGTTGGCCTGCAGCGCGTCCCCCTGGCGGATGAGGTACTCTCCCGGGGCACAGAACGAGGTCTTGATGTGCAAGGAGAGGGAGCGCAGACACCCCCTACTGGCCCGCTCAAACACTGGCAGCTGCAGGATGTCCTTGTTCAGGTGCATGGCGATGTCCGCACGAAGTTCGTCTGGGAAGTCACGCAGCA

Function

NR:

description
potassium voltage-gated channel subfamily H member 4-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1256842 True 246 lncRNA 0.60 1 70345476 70345721

Neighbor

gene id symbol gene type direction distance location
LOC110538185 kbrs2 coding upstream 297231 70044585 ~ 70048245 (+)
LOC110539166 LOC106601013 coding upstream 377988 69965506 ~ 69967488 (+)
LOC110538177 LOC106607277 coding upstream 387956 69952422 ~ 69957520 (+)
LOC110538175 LOC106601009 coding upstream 410098 69907421 ~ 69935378 (+)
LOC110538173 LOC106607273 coding upstream 470446 69823215 ~ 69875030 (+)
LOC118937908 NA coding downstream 36448 70382169 ~ 70382221 (+)
LOC110538197 LOC106601026 coding downstream 295243 70640964 ~ 70664813 (+)
LOC110538199 LOC106607392 coding downstream 388518 70734239 ~ 70736353 (+)
si:ch73-141c7.1 LOC106601031 coding downstream 399814 70745535 ~ 70750237 (+)
LOC110538201 LOC106601034 coding downstream 406793 70752514 ~ 70754545 (+)
G1105372 NA non-coding upstream 767 70344403 ~ 70344709 (+)
G1105371 kcnh4 non-coding upstream 1706 70343486 ~ 70343770 (+)
G1105356 NA non-coding upstream 21044 70318710 ~ 70324432 (+)
G1105358 kat2a non-coding upstream 27548 70317694 ~ 70317928 (+)
G1105355 NA non-coding upstream 28146 70317127 ~ 70317330 (+)
G1105374 NA non-coding downstream 2167 70347888 ~ 70348224 (+)
G1105442 NA non-coding downstream 115522 70461243 ~ 70461603 (+)
G1105450 NA non-coding downstream 126615 70472336 ~ 70474775 (+)
G1105452 sta5b non-coding downstream 137305 70483026 ~ 70506853 (+)
G1105453 NA non-coding downstream 138105 70483826 ~ 70484457 (+)
G1105357 NA other upstream 18350 70324958 ~ 70327126 (+)
G1105281 NA other upstream 150804 70162689 ~ 70194672 (+)
G1105194 NA other upstream 296489 70022708 ~ 70048987 (+)
LOC110538155 LOC106600992 other upstream 1027828 69315451 ~ 69321518 (+)
G1105393 NA other downstream 25034 70370755 ~ 70371211 (+)
G1105467 LOC106601028 other downstream 266582 70612303 ~ 70633971 (+)
G1105655 NA other downstream 557184 70902905 ~ 70906429 (+)
psmg3 psmg3 other downstream 1595830 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 1671872 72016045 ~ 72019145 (+)

Expression


Co-expression Network