G1105374


Basic Information

Item Value
gene id G1105374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70347888 ~ 70348224 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1256843
agtgtagacattgttaatgttgtaaatgactactgtagctggaaatggctgatttttaatggaatatctacataggcatacagaggcccattatcagcaaccatcactcctgttttccaatggcacattgtgttagctaatccaagttgatcattttgaaaggctaattgatcattagaaaacccttttgcaattatgttagcacagttgaaagctgttgtcctgattaaagaagaaatacaaatggccttctttagactagttgagtatctggagcatcagcatctgTGCAACCGAGCTGGAATaacacattatggcctttctcttgcatttcaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1256843 True 337 lncRNA 0.37 1 70347888 70348224

Neighbor

gene id symbol gene type direction distance location
LOC110538185 kbrs2 coding upstream 299643 70044585 ~ 70048245 (+)
LOC110539166 LOC106601013 coding upstream 380400 69965506 ~ 69967488 (+)
LOC110538177 LOC106607277 coding upstream 390368 69952422 ~ 69957520 (+)
LOC110538175 LOC106601009 coding upstream 412510 69907421 ~ 69935378 (+)
LOC110538173 LOC106607273 coding upstream 472858 69823215 ~ 69875030 (+)
LOC118937908 NA coding downstream 33945 70382169 ~ 70382221 (+)
LOC110538197 LOC106601026 coding downstream 292740 70640964 ~ 70664813 (+)
LOC110538199 LOC106607392 coding downstream 386015 70734239 ~ 70736353 (+)
si:ch73-141c7.1 LOC106601031 coding downstream 397311 70745535 ~ 70750237 (+)
LOC110538201 LOC106601034 coding downstream 404290 70752514 ~ 70754545 (+)
G1105373 LOC106601023 non-coding upstream 2167 70345476 ~ 70345721 (+)
G1105372 NA non-coding upstream 3179 70344403 ~ 70344709 (+)
G1105371 kcnh4 non-coding upstream 4118 70343486 ~ 70343770 (+)
G1105356 NA non-coding upstream 23456 70318710 ~ 70324432 (+)
G1105358 kat2a non-coding upstream 29960 70317694 ~ 70317928 (+)
G1105442 NA non-coding downstream 113019 70461243 ~ 70461603 (+)
G1105450 NA non-coding downstream 124112 70472336 ~ 70474775 (+)
G1105452 sta5b non-coding downstream 134802 70483026 ~ 70506853 (+)
G1105453 NA non-coding downstream 135602 70483826 ~ 70484457 (+)
G1105477 NA non-coding downstream 158839 70507063 ~ 70507438 (+)
G1105357 NA other upstream 20762 70324958 ~ 70327126 (+)
G1105281 NA other upstream 153216 70162689 ~ 70194672 (+)
G1105194 NA other upstream 298901 70022708 ~ 70048987 (+)
LOC110538155 LOC106600992 other upstream 1030240 69315451 ~ 69321518 (+)
G1105393 NA other downstream 22531 70370755 ~ 70371211 (+)
G1105467 LOC106601028 other downstream 264079 70612303 ~ 70633971 (+)
G1105655 NA other downstream 554681 70902905 ~ 70906429 (+)
psmg3 psmg3 other downstream 1593327 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 1669369 72016045 ~ 72019145 (+)

Expression


Co-expression Network