G1105442


Basic Information

Item Value
gene id G1105442
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70461243 ~ 70461603 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1256916
ACActagcaccacaacacactacacaaGAACTACActagcaccacaacacactacacatgaACTACActagcaccacaacacactacacaaGAACTACActagcaccacaacacactacacatgaACTACActagcaccacaacacactacacatgaACTACActagcaccacaacacactacacatgaACTACActagcaccacaacacactacacaaGAACTACActagcaccacaacacactacacatgaACTACActagcaccacaacacactacacatgaACTACActagcaccacaacacactacacattaACTACActagca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1256916 True 329 lncRNA 0.43 2 70461243 70461603

Neighbor

gene id symbol gene type direction distance location
LOC118937908 NA coding upstream 79022 70382169 ~ 70382221 (+)
LOC110538185 kbrs2 coding upstream 412998 70044585 ~ 70048245 (+)
LOC110539166 LOC106601013 coding upstream 493755 69965506 ~ 69967488 (+)
LOC110538177 LOC106607277 coding upstream 503723 69952422 ~ 69957520 (+)
LOC110538175 LOC106601009 coding upstream 525865 69907421 ~ 69935378 (+)
LOC110538197 LOC106601026 coding downstream 179361 70640964 ~ 70664813 (+)
LOC110538199 LOC106607392 coding downstream 272636 70734239 ~ 70736353 (+)
si:ch73-141c7.1 LOC106601031 coding downstream 283932 70745535 ~ 70750237 (+)
LOC110538201 LOC106601034 coding downstream 290911 70752514 ~ 70754545 (+)
LOC110538203 LOC106601033 coding downstream 295051 70756654 ~ 70758166 (+)
G1105374 NA non-coding upstream 113019 70347888 ~ 70348224 (+)
G1105373 LOC106601023 non-coding upstream 115522 70345476 ~ 70345721 (+)
G1105372 NA non-coding upstream 116534 70344403 ~ 70344709 (+)
G1105371 kcnh4 non-coding upstream 117473 70343486 ~ 70343770 (+)
G1105356 NA non-coding upstream 136811 70318710 ~ 70324432 (+)
G1105450 NA non-coding downstream 10733 70472336 ~ 70474775 (+)
G1105452 sta5b non-coding downstream 21423 70483026 ~ 70506853 (+)
G1105453 NA non-coding downstream 22223 70483826 ~ 70484457 (+)
G1105477 NA non-coding downstream 45460 70507063 ~ 70507438 (+)
G1105478 NA non-coding downstream 51228 70512831 ~ 70568984 (+)
G1105393 NA other upstream 90032 70370755 ~ 70371211 (+)
G1105357 NA other upstream 134117 70324958 ~ 70327126 (+)
G1105281 NA other upstream 266571 70162689 ~ 70194672 (+)
G1105194 NA other upstream 412256 70022708 ~ 70048987 (+)
LOC110538173 LOC106607273 other upstream 606048 69823215 ~ 69875030 (+)
G1105467 LOC106601028 other downstream 150700 70612303 ~ 70633971 (+)
G1105655 NA other downstream 441302 70902905 ~ 70906429 (+)
psmg3 psmg3 other downstream 1479948 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 1555990 72016045 ~ 72019145 (+)
G1109505 NA other downstream 2843822 73305425 ~ 73306154 (+)

Expression


Co-expression Network