G1105529


Basic Information

Item Value
gene id G1105529
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70572239 ~ 70572498 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1257013
gttgttgtcttacccgttgttgtcttagctagctctcccaatcaacacctgtgattgctttatgcctcgctttatgtctctctcaaatgtcaatatgtcttgtatactgttgtttaggatagttatcagTGTTAAGGTTTACTGCAAAGCCCCTAGTCCCACtaaacatgcctcagatacctcctttgtcccacctcccacacatgtggtgacctcacccagcAAAACTAGCGCATCCAGAGATGCAACCcgtcttatca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1257013 True 260 lncRNA 0.45 1 70572239 70572498

Neighbor

gene id symbol gene type direction distance location
LOC118937908 NA coding upstream 190018 70382169 ~ 70382221 (+)
LOC110538185 kbrs2 coding upstream 523994 70044585 ~ 70048245 (+)
LOC110539166 LOC106601013 coding upstream 604751 69965506 ~ 69967488 (+)
LOC110538177 LOC106607277 coding upstream 614719 69952422 ~ 69957520 (+)
LOC110538175 LOC106601009 coding upstream 636861 69907421 ~ 69935378 (+)
LOC110538197 LOC106601026 coding downstream 68466 70640964 ~ 70664813 (+)
LOC110538199 LOC106607392 coding downstream 161741 70734239 ~ 70736353 (+)
si:ch73-141c7.1 LOC106601031 coding downstream 173037 70745535 ~ 70750237 (+)
LOC110538201 LOC106601034 coding downstream 180016 70752514 ~ 70754545 (+)
LOC110538203 LOC106601033 coding downstream 184156 70756654 ~ 70758166 (+)
G1105478 NA non-coding upstream 3255 70512831 ~ 70568984 (+)
G1105477 NA non-coding upstream 64801 70507063 ~ 70507438 (+)
G1105452 sta5b non-coding upstream 65386 70483026 ~ 70506853 (+)
G1105453 NA non-coding upstream 87782 70483826 ~ 70484457 (+)
G1105450 NA non-coding upstream 97464 70472336 ~ 70474775 (+)
G1105531 NA non-coding downstream 4068 70576566 ~ 70576930 (+)
G1105535 NA non-coding downstream 7841 70580339 ~ 70580599 (+)
G1105539 NA non-coding downstream 12468 70584966 ~ 70585292 (+)
G1105540 NA non-coding downstream 12919 70585417 ~ 70585660 (+)
G1105466 NA non-coding downstream 14668 70587166 ~ 70588997 (+)
G1105393 NA other upstream 201028 70370755 ~ 70371211 (+)
G1105357 NA other upstream 245113 70324958 ~ 70327126 (+)
G1105281 NA other upstream 377567 70162689 ~ 70194672 (+)
G1105194 NA other upstream 523252 70022708 ~ 70048987 (+)
LOC110538173 LOC106607273 other upstream 717044 69823215 ~ 69875030 (+)
G1105467 LOC106601028 other downstream 39805 70612303 ~ 70633971 (+)
G1105655 NA other downstream 330407 70902905 ~ 70906429 (+)
psmg3 psmg3 other downstream 1369053 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 1445095 72016045 ~ 72019145 (+)
G1109505 NA other downstream 2732927 73305425 ~ 73306154 (+)

Expression


Co-expression Network