G1105535


Basic Information

Item Value
gene id G1105535
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70580339 ~ 70580599 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1257019
AGGGGTATCATCATCCTCTTCACTGCCagattctacagggatgctgtctGGAAAGCTGCTAGGAAGAACGCCTTCCTTCAGAGCCATGGTAAGCGTTTCGCCGAGCATCTCAGCCCGGAGGACATAGAAAGAAGGAACAAGTTGTGGCCAACGATCAAGATAGCACGAAATGAGGAAAAGGCTGCTTACTTCGTCGGAGGACGAGGCTTCATCAACGGTTCAGAAATCCATATTCCTCCCTAAAATCTCACCAGAAGGAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1257019 True 261 lncRNA 0.49 1 70580339 70580599

Neighbor

gene id symbol gene type direction distance location
LOC118937908 NA coding upstream 198118 70382169 ~ 70382221 (+)
LOC110538185 kbrs2 coding upstream 532094 70044585 ~ 70048245 (+)
LOC110539166 LOC106601013 coding upstream 612851 69965506 ~ 69967488 (+)
LOC110538177 LOC106607277 coding upstream 622819 69952422 ~ 69957520 (+)
LOC110538175 LOC106601009 coding upstream 644961 69907421 ~ 69935378 (+)
LOC110538197 LOC106601026 coding downstream 60365 70640964 ~ 70664813 (+)
LOC110538199 LOC106607392 coding downstream 153640 70734239 ~ 70736353 (+)
si:ch73-141c7.1 LOC106601031 coding downstream 164936 70745535 ~ 70750237 (+)
LOC110538201 LOC106601034 coding downstream 171915 70752514 ~ 70754545 (+)
LOC110538203 LOC106601033 coding downstream 176055 70756654 ~ 70758166 (+)
G1105531 NA non-coding upstream 3409 70576566 ~ 70576930 (+)
G1105529 NA non-coding upstream 7841 70572239 ~ 70572498 (+)
G1105478 NA non-coding upstream 11355 70512831 ~ 70568984 (+)
G1105477 NA non-coding upstream 72901 70507063 ~ 70507438 (+)
G1105452 sta5b non-coding upstream 73486 70483026 ~ 70506853 (+)
G1105539 NA non-coding downstream 4367 70584966 ~ 70585292 (+)
G1105540 NA non-coding downstream 4818 70585417 ~ 70585660 (+)
G1105466 NA non-coding downstream 6567 70587166 ~ 70588997 (+)
G1105476 stat3 non-coding downstream 14820 70595419 ~ 70596175 (+)
G1105565 NA non-coding downstream 57443 70638042 ~ 70638477 (+)
G1105393 NA other upstream 209128 70370755 ~ 70371211 (+)
G1105357 NA other upstream 253213 70324958 ~ 70327126 (+)
G1105281 NA other upstream 385667 70162689 ~ 70194672 (+)
G1105194 NA other upstream 531352 70022708 ~ 70048987 (+)
LOC110538173 LOC106607273 other upstream 725144 69823215 ~ 69875030 (+)
G1105467 LOC106601028 other downstream 31704 70612303 ~ 70633971 (+)
G1105655 NA other downstream 322306 70902905 ~ 70906429 (+)
psmg3 psmg3 other downstream 1360952 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 1436994 72016045 ~ 72019145 (+)
G1109505 NA other downstream 2724826 73305425 ~ 73306154 (+)

Expression


Co-expression Network