G1105467 (LOC106601028)


Basic Information

Item Value
gene id G1105467
gene name LOC106601028
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70612303 ~ 70633971 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1256950
ACAgacatgtattttatttgttcACCTTTGCTGCCGGCACAAACAAAATTGGATAGCACTTACATTTCTGTATGTCACTATAGACTTTCATTTAACTGTCACCTGGCACATTGACCTGTGCTGGAGGGGTTCTTACAAGATTCTCTCCTTTGTCTCCCCACAATTACAGCACCCAATGCAGTCCAGGTGAAGTGCTGGATATATCCTGTCGTTAGCTGTGGCCATGGTGATAGATTCAATAAGCAAGGCTCTGTCAATCTCAGACAGACTCCTCTTCCAGGAGAGAAGCCTCTGGAGTAACAGTAACGTGGCAGGTTAACACAGTTATGTCTGTGCTTGTTATAgcatatatgtacagtacatgcatgAGTCTTGTAGCACAATGAGCATACATGCACACAGTTGTACAATGTGTGTCAGTacaattaaaaatgtttttttttatttgtatttttatgaacGTTATCATGTAAGCACAGTGAGAGAAAAAACAAGGAAACAAGTTAACTTCTACAGAACGACGGCACTAGGAACCTTTGATCAGTGACCAGCCCTAGTAACAACCAGGTAGTTTGGTGGTTACACTGGTAACTTAAAACTGAGAGTAAGATAACGATTTTCCAGATATCACAATATAGTACAACTTAGAAACTTGATGaaacattctttaaaaaaaggaAGGCAAAACTATGCAACTAAATTCAGATCTCTTTCAAGTCGTCACTAATCCTTCATCCTTCTCGTTCTCTgtttcaaaacaacaacaaaaaataggaTCTGTTGCGATCCTGTTTTTTACGTGaaaaacttttgaaatatttaaaGAGGATTACTTTACACACCTGGCACCCATCCACCCCATAACATAATTTAAAGGTACACTAGTTTTTCCCTGATTGGCTCAGGATTTGTGGCTGAAGAGAACCTTGAAGTGTCGTCTCTTGAGCAGCTCGTTCTCGTTGCTCTCCAGCTTCTTGATCTGGCCCGCCTGCTTCTCCAGGTTGGTGCGGACCGTCTTCACGTTGACGCTGACCTTGCGCACCTTGTCCAGCATCTTGTTGACGGTGTTGGCCGTGCCAGTGTGGCTCTTGGACAGCTTGGCCAGCTCTCCCTGGATGCAAGAAACAGACTTCTCCATGTCCTGCTGTCTGGTCTCCAGCCCGTTCTGGGTCTGCTGGATCTGGTCAACCACCCCGATGATCTTGTCCAGCAGAGTCAGCACCATGACCCCATTTACCTGCGCCTCACTCTTGGTGCCCGAGCCCGTGGCCAGCACCAGGGACACCTCCTCGTCGTCGTCAGACACCTCGGTCAGAGCCACTCGCCCCTTCTGCAAGCCTGCTGGATCCGCCATGGCTGTCAAGTCCAAACACACACCGCTCAGCTCTCACGCTCACTCAGGATAAAAATACACTACCGGGAGAACAAACTTTGAGGGGCCACCCTGACCAAAATTCTGATCCAAATACTTTTCCTTTCTATGAAGGGACACTTCCACTTCCTTGGCGTTTTTCCTCTTCCCAATTTCAAGTCTACTTGTCTTCTTGCTGTATTACTTTTCCTCCTTTTTCTCTTAttctcagtctttctctctatctgtctttgCGTCTGCCCTGGGATGCTGGCCAACCAACGGGAGTGGAGCCTCTCACTGCTGAGGCATGTGTGTCCTGA

Function

NR:

description
polymerase I and transcript release factor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1256950 True 1674 TUCP 0.46 3 70612303 70633971

Neighbor

gene id symbol gene type direction distance location
LOC118937908 NA coding upstream 230082 70382169 ~ 70382221 (+)
LOC110538185 kbrs2 coding upstream 564058 70044585 ~ 70048245 (+)
LOC110539166 LOC106601013 coding upstream 644815 69965506 ~ 69967488 (+)
LOC110538177 LOC106607277 coding upstream 654783 69952422 ~ 69957520 (+)
LOC110538175 LOC106601009 coding upstream 676925 69907421 ~ 69935378 (+)
LOC110538197 LOC106601026 coding downstream 6993 70640964 ~ 70664813 (+)
LOC110538199 LOC106607392 coding downstream 100268 70734239 ~ 70736353 (+)
si:ch73-141c7.1 LOC106601031 coding downstream 111564 70745535 ~ 70750237 (+)
LOC110538201 LOC106601034 coding downstream 118543 70752514 ~ 70754545 (+)
LOC110538203 LOC106601033 coding downstream 122683 70756654 ~ 70758166 (+)
G1105476 stat3 non-coding upstream 16128 70595419 ~ 70596175 (+)
G1105466 NA non-coding upstream 23306 70587166 ~ 70588997 (+)
G1105540 NA non-coding upstream 26643 70585417 ~ 70585660 (+)
G1105539 NA non-coding upstream 27011 70584966 ~ 70585292 (+)
G1105535 NA non-coding upstream 31704 70580339 ~ 70580599 (+)
G1105565 NA non-coding downstream 4071 70638042 ~ 70638477 (+)
G1105573 NA non-coding downstream 31829 70665800 ~ 70666048 (+)
G1105619 LOC106601032 non-coding downstream 127071 70761042 ~ 70774919 (+)
LOC110538205 LOC106601037 non-coding downstream 185192 70807167 ~ 70827806 (+)
G1105661 NA non-coding downstream 214517 70848488 ~ 70848715 (+)
G1105393 NA other upstream 241092 70370755 ~ 70371211 (+)
G1105357 NA other upstream 285177 70324958 ~ 70327126 (+)
G1105281 NA other upstream 417631 70162689 ~ 70194672 (+)
G1105194 NA other upstream 563316 70022708 ~ 70048987 (+)
LOC110538173 LOC106607273 other upstream 757108 69823215 ~ 69875030 (+)
G1105655 NA other downstream 268934 70902905 ~ 70906429 (+)
psmg3 psmg3 other downstream 1307580 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 1383622 72016045 ~ 72019145 (+)
G1109505 NA other downstream 2671454 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 2750837 73384755 ~ 73386199 (+)

Expression


Co-expression Network