G1105565


Basic Information

Item Value
gene id G1105565
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70638042 ~ 70638477 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1257049
tctgtactgacgcttagcttgtttgatagccttacggagggaatagctgcactgtttgtattcggtcatgttaccagtcaccttgccctgattaaaagcagtggttcgcgctttcagtttcacgcgaatgctgccatcaatccacggtttctggttagggaatgttttaatcattgctatgggaacgacatcttcaacgcacgttctaatgaactcgcacaccgaatcagcgtattcgtcaatattgttatctgacgcaatacgaaacatgtcccagtccacgtgatggaagcagtcttggagtgtggagtcagcttggtcggaccagcgttggacagacctcagcgtgggagcctcttgttttagtttctgtctgtaggcagggatcaacaaaatggaatcgtggtcagcttttccgaaaggagggcggggcagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1257049 True 436 lncRNA 0.49 1 70638042 70638477

Neighbor

gene id symbol gene type direction distance location
LOC118937908 NA coding upstream 255821 70382169 ~ 70382221 (+)
LOC110538185 kbrs2 coding upstream 589797 70044585 ~ 70048245 (+)
LOC110539166 LOC106601013 coding upstream 670554 69965506 ~ 69967488 (+)
LOC110538177 LOC106607277 coding upstream 680522 69952422 ~ 69957520 (+)
LOC110538175 LOC106601009 coding upstream 702664 69907421 ~ 69935378 (+)
LOC110538197 LOC106601026 coding downstream 2487 70640964 ~ 70664813 (+)
LOC110538199 LOC106607392 coding downstream 95762 70734239 ~ 70736353 (+)
si:ch73-141c7.1 LOC106601031 coding downstream 107058 70745535 ~ 70750237 (+)
LOC110538201 LOC106601034 coding downstream 114037 70752514 ~ 70754545 (+)
LOC110538203 LOC106601033 coding downstream 118177 70756654 ~ 70758166 (+)
G1105476 stat3 non-coding upstream 41867 70595419 ~ 70596175 (+)
G1105466 NA non-coding upstream 49045 70587166 ~ 70588997 (+)
G1105540 NA non-coding upstream 52382 70585417 ~ 70585660 (+)
G1105539 NA non-coding upstream 52750 70584966 ~ 70585292 (+)
G1105535 NA non-coding upstream 57443 70580339 ~ 70580599 (+)
G1105573 NA non-coding downstream 27323 70665800 ~ 70666048 (+)
G1105619 LOC106601032 non-coding downstream 122565 70761042 ~ 70774919 (+)
LOC110538205 LOC106601037 non-coding downstream 180686 70807167 ~ 70827806 (+)
G1105661 NA non-coding downstream 210011 70848488 ~ 70848715 (+)
G1105664 NA non-coding downstream 212893 70851370 ~ 70852131 (+)
G1105467 LOC106601028 other upstream 4071 70612303 ~ 70633971 (+)
G1105393 NA other upstream 266831 70370755 ~ 70371211 (+)
G1105357 NA other upstream 310916 70324958 ~ 70327126 (+)
G1105281 NA other upstream 443370 70162689 ~ 70194672 (+)
G1105194 NA other upstream 589055 70022708 ~ 70048987 (+)
G1105655 NA other downstream 264428 70902905 ~ 70906429 (+)
psmg3 psmg3 other downstream 1303074 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 1379116 72016045 ~ 72019145 (+)
G1109505 NA other downstream 2666948 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 2746331 73384755 ~ 73386199 (+)

Expression


Co-expression Network